RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 TREX2Q9BQ50 279 aaPredicted RBP13.23□□□□□ -0.29
ERCC1-203ENST00000340192 UBQLN4Q9NRR5 601 aa13.23□□□□□ -0.29
ERCC1-203ENST00000340192 AIG1Q9NVV5 245 aa13.23□□□□□ -0.29
ERCC1-203ENST00000340192 KCNE3Q9Y6H6 103 aa13.23□□□□□ -0.29
ERCC1-203ENST00000340192 NOTCH2Q04721 2471 aa13.23□□□□□ -0.29
ERCC1-203ENST00000340192 RNF103-CHMP3A0A140T963 221 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 PRSS51A0A1B0GVH4 220 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 MBD3L4A6NDZ8 208 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-203ENST00000340192 MBD3L3A6NE82 208 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-203ENST00000340192 MBD3L5A6NJ08 208 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-203ENST00000340192 E9PBE3 544 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 SLCO1B7G3V0H7 640 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 KLF11O14901 512 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 SCN2BO60939 215 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 HPGDP15428 266 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 ZNF708P17019 499 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 BMP5P22003 454 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 CLDN18P56856 261 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 RPS26P62854 115 aaKnown RBP13.22□□□□□ -0.29
ERCC1-203ENST00000340192 PHC1P78364 1004 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 FAM174BQ3ZCQ3 159 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 TTMPQ5BVD1 217 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 SPANXN4Q5MJ08 99 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 DCST2Q5T1A1 773 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 ANXA8L1Q5VT79 327 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 GDF7Q7Z4P5 450 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 C6orf120Q7Z4R8 191 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 ADGRE4PQ86SQ3 457 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 ZNF295-AS1Q8N0V1 137 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 GATSQ8NAP1 163 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 VPS37AQ8NEZ2 397 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 OR5D16Q8NGK9 328 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 OR5M1Q8NGP8 315 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 MBD3L2Q8NHZ7 208 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-203ENST00000340192 ZNF75CPQ92670 426 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-203ENST00000340192 ATP6V1G3Q96LB4 118 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 TEX37Q96LM6 180 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 OR7D2Q96RA2 312 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 PCDHGB4Q9UN71 923 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 INTS1Q8N201 2190 aaKnown RBP13.22□□□□□ -0.29
ERCC1-203ENST00000340192 CSMD1Q96PZ7 3565 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 ABCA12Q86UK0 2595 aa13.22□□□□□ -0.29
ERCC1-203ENST00000340192 CLCA1A8K7I4 914 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 SCDO00767 359 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 DVL2O14641 736 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 SOX30O94993 753 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 CPSF4O95639 269 aaKnown RBP13.21□□□□□ -0.29
ERCC1-203ENST00000340192 POU3F2P20265 443 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-203ENST00000340192 ATP6V1C1P21283 382 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 MATN1P21941 496 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 ZNF136P52737 540 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 UFM1P61960 85 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 BCL2A1Q16548 175 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 DPY19L1Q2PZI1 675 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 SLC9B1Q4ZJI4 515 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 NXNQ6DKJ4 435 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 POMZP3Q6PJE2 187 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 ARSKQ6UWY0 536 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 PLXDC2Q6UX71 529 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 MAVSQ7Z434 540 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 UBQLNLQ8IYU4 475 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 C9orf106Q8NAJ2 232 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 RELL2Q8NC24 303 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-203ENST00000340192 PIWIL2Q8TC59 973 aaKnown RBP13.21□□□□□ -0.29
ERCC1-203ENST00000340192 UCN2Q96RP3 112 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 PIGQQ9BRB3 760 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 SERHL2Q9H4I8 314 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 HHATLQ9HCP6 504 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 ZNF629Q9UEG4 869 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-203ENST00000340192 ZNF337Q9Y3M9 751 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 GPR45Q9Y5Y3 372 aa13.21□□□□□ -0.29
ERCC1-203ENST00000340192 MED12LQ86YW9 2145 aa13.21□□□□□ -0.3
ERCC1-203ENST00000340192 NPIPA5A0A0B4J1W7 369 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 A0A1W2PQD3 144 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 OR2M5A3KFT3 312 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 SHISA8B8ZZ34 492 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 C9JVG2 144 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 NPIPA7E9PJI5 369 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 H3BML4 177 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 LINC01387J3KSC0 135 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 NPIPA8P0DM63 369 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 PEPDP12955 493 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 UQCRC2P22695 453 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 IL12AP29459 219 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 S100A3P33764 101 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 DGKQP52824 942 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 CASP9P55211 416 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 CD226Q15762 336 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 GLYR1Q49A26 553 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-203ENST00000340192 FLYWCH1Q4VC44 716 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 HDXQ7Z353 690 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 MISPQ8IVT2 679 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 DMRTC2Q8IXT2 367 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-203ENST00000340192 ZNF527Q8NB42 609 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 GOT1L1Q8NHS2 421 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-203ENST00000340192 SH3YL1Q96HL8 342 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-203ENST00000340192 MAELQ96JY0 434 aaKnown RBP13.2□□□□□ -0.3
ERCC1-203ENST00000340192 SLC35G5Q96KT7 338 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 HOXD1Q9GZZ0 328 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 ARGLU1Q9NWB6 273 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms