RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 EBLN1P0CF75 366 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 DTYMKP23919 212 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CRATP43155 626 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SSR2P43308 183 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GRIA4P48058 902 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CLCNKBP51801 687 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GPR85P60893 370 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 HERVK_113P63132 956 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RAB40BQ12829 278 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ARFRP1Q13795 201 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NEDD8Q15843 81 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CDKN3Q16667 212 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 DUSP7Q16829 419 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF792Q3KQV3 632 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ARSIQ5FYB1 569 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PLEKHS1Q5SXH7 462 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 HENMT1Q5T8I9 393 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LIPJQ5W064 366 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ABLIM2Q6H8Q1 611 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NDUFAF7Q7L592 441 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LACC1Q8IV20 430 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TMEFF1Q8IYR6 380 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FAM185AQ8N0U4 392 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 OR2L3Q8NG85 312 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 C1orf54Q8WWF1 131 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FGF13Q92913 245 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GNPNAT1Q96EK6 184 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 UBXN10Q96LJ8 280 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NAA11Q9BSU3 229 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ERVK-6Q9BXR3 956 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ABCG8Q9H221 673 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ZBTB26Q9HCK0 441 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TAS2R9Q9NYW1 312 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RBPJLQ9UBG7 517 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 KCNG2Q9UJ96 466 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PTRH2Q9Y3E5 179 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PRKAB1Q9Y478 270 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 A0A0J9YYE9 177 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 A8MX80 341 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TLR4O00206 839 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RNASET2O00584 256 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FADS1O60427 444 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ADAM23O75077 832 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CDK14O94921 469 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CBX7O95931 251 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RHCEP18577 417 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CPOXP36551 454 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RAD52P43351 418 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RARRES1P49788 294 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 HLCSP50747 726 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RACK1P63244 317 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SERTAD2Q14140 314 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 C9orf57Q5W0N0 161 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CXorf57Q6NSI4 855 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LCLAT1Q6UWP7 414 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PDSS2Q86YH6 399 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CNEP1R1Q8N9A8 125 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 IFI44Q8TCB0 444 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 AUTS2Q8WXX7 1259 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 MUL1Q969V5 352 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 DCSTAMPQ9H295 470 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PREBQ9HCU5 417 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GPR173Q9NS66 373 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 KCNIP1Q9NZI2 227 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PGAP2Q9UHJ9 254 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ARFGEF3Q5TH69 2177 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SCN1AP35498 2009 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM131Q92545 1883 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GGT3PA6NGU5 568 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 A6NIZ1 184 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GALR2O43603 387 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 HPGDSO60760 199 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 MAFO75444 373 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 OR2B3O76000 313 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ACTL6BO94805 426 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 KCNK2O95069 426 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 MT-ND4LP03901 98 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FUCA1P04066 466 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 IL7P13232 177 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PAX6P26367 422 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GGT2P36268 569 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 MCCD1P59942 119 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RAP1BP61224 184 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RAP1AP62834 184 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 EVX2Q03828 476 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 UGT8Q16880 541 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LIPIQ6XZB0 460 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ANKRD33Q7Z3H0 272 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SLC22A16Q86VW1 577 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CLDN22Q8N7P3 220 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF454Q8N9F8 522 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 MDGA1Q8NFP4 955 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 OR2L5Q8NG80 312 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 OR5D16Q8NGK9 328 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 KCNG3Q8TAE7 436 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RPUSD4Q96CM3 377 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SGTBQ96EQ0 304 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TXNDC15Q96J42 360 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ZCCHC4Q9H5U6 513 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 REEP4Q9H6H4 257 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms