RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 NKX2-2O95096 273 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 SLC2A10O95528 541 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 CFIP05156 583 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 CKMT1AP12532 417 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 TDGF1P13385 188 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 NID1P14543 1247 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 ITIH1P19827 911 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 RPS4Y1P22090 263 aaKnown RBP6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 GRK5P34947 590 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 ARL4DP49703 201 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 CDC42P60953 191 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 VBP1P61758 197 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 LARS2Q15031 903 aaKnown RBP6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 PMS2CLQ68D20 193 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 SLC30A6Q6NXT4 461 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 DHRS4L2Q6PKH6 230 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 B3GLCTQ6Y288 498 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 PRSS48Q7RTY5 328 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 GATSQ8NAP1 163 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 GRHL3Q8TE85 626 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 RORBQ92753 470 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 ATOH1Q92858 354 aaPredicted RBP6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 SENP5Q96HI0 755 aaPredicted RBP6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 CNDP2Q96KP4 475 aaKnown RBP6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 TUBA1CQ9BQE3 449 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 ITPAQ9BY32 194 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 SAP130Q9H0E3 1048 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 RNF167Q9H6Y7 350 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 FGF21Q9NSA1 209 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 PCDHGB1Q9Y5G3 927 aa6.85□□□□□ -1.31
SRFBP1-201ENST00000339397 PCNX3Q9H6A9 2034 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 CNTRLQ7Z7A1 2325 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 IGHV3-20A0A0C4DH32 117 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 C17orf105B2RV13 164 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 AP3D1O14617 1153 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 DUX1O43812 170 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 GMFGO60234 142 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 OXSR1O95747 527 aaPredicted RBP6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 CDK1P06493 297 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 HSMCR30P0CW71 290 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 CDK4P11802 303 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 GNSP15586 552 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 MAGEA8P43361 318 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ARRB1P49407 418 aaPredicted RBP6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 RPS6KA3P51812 740 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 NCS1P62166 190 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ZXDAP98168 799 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ST3GAL3Q11203 375 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 NFATC3Q12968 1075 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 GRM7Q14831 915 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 OR1Q1Q15612 314 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 PLK5Q496M5 336 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 KANSL1Q7Z3B3 1105 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 PLXDC1Q8IUK5 500 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF595Q8IYB9 648 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 PRR22Q8IZ63 422 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF615Q8N8J6 731 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 OR6C4Q8NGE1 309 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 SAP25Q8TEE9 199 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 SLC38A4Q969I6 547 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 STACQ99469 402 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 OR8D2Q9GZM6 311 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 SYNDIG1Q9H7V2 258 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 AKIRIN1Q9H9L7 192 aaPredicted RBP6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 VCX3AQ9NNX9 186 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 PRDM9Q9NQV7 894 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 FKBP14Q9NWM8 211 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 KLHL28Q9NXS3 571 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 CTSFQ9UBX1 484 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ZFHX4Q86UP3 3567 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 NGFRP08138 427 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 MAKP20794 623 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ST13P50502 369 aaKnown RBP6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 SMIM11AP58511 58 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 FXYD6P3P58550 94 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 CCL7P80098 99 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 IGLV3-21P80748 117 aaPredicted RBP6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ROR2Q01974 943 aaKnown RBP6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 TRAM2Q15035 370 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 TCTE1Q5JU00 501 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 SYT6Q5T7P8 510 aaPredicted RBP6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 SLX4IPQ5VYV7 408 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 C12orf73Q69YU5 71 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 APOOLQ6UXV4 268 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 LANCL3Q6ZV70 420 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 SHFQ7M4L6 423 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 D2HGDHQ8N465 521 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 EID2Q8N6I1 236 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 NDNFQ8TB73 568 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 RELTQ969Z4 430 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF501Q96CX3 271 aaPredicted RBP6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 DPYSL5Q9BPU6 564 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 DPH1Q9BZG8 443 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 RTN4RQ9BZR6 473 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 RAB33BQ9H082 229 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 GAREM1Q9H706 876 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 SLC22A11Q9NSA0 550 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 NLGN3Q9NZ94 848 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 IFT52Q9Y366 437 aa6.84□□□□□ -1.31
SRFBP1-201ENST00000339397 KNTC1P50748 2209 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms