RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ACAD8Q9UKU7 415 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 ICKQ9UPZ9 632 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 NDUFS4O43181 175 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 OR12D1P0DN82 309 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 HOXB3P14651 431 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-201ENST00000338910 ACSL1P33121 698 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 CD79BP40259 229 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 MANFP55145 182 aaKnown RBP17.54■□□□□ 0.4
PSPC1-201ENST00000338910 CCDC85BQ15834 202 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-201ENST00000338910 RPE65Q16518 533 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 COL28A1Q2UY09 1125 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 BCL2L15Q5TBC7 163 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 GPR139Q6DWJ6 353 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 DEF8Q6ZN54 512 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 KCTD20Q7Z5Y7 419 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 KIF18BQ86Y91 864 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 ZNF655Q8N720 491 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-201ENST00000338910 OR4D11Q8NGI4 311 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 SLC38A5Q8WUX1 472 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 EXOSC8Q96B26 276 aaKnown RBP17.54■□□□□ 0.4
PSPC1-201ENST00000338910 RNF32Q9H0A6 362 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 GHITMQ9H3K2 345 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 C8orf33Q9H7E9 229 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-201ENST00000338910 MVB12BQ9H7P6 319 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 C12orf4Q9NQ89 552 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 SLCO1C1Q9NYB5 712 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 TAS2R7Q9NYW3 318 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 RABL2BQ9UNT1 228 aa17.54■□□□□ 0.4
PSPC1-201ENST00000338910 BET1O15155 118 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 NARSO43776 548 aaKnown RBP17.53■□□□□ 0.4
PSPC1-201ENST00000338910 PAHP00439 452 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 LALBAP00709 142 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 NDUFV2P19404 249 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 CFL1P23528 166 aaKnown RBP17.53■□□□□ 0.4
PSPC1-201ENST00000338910 SOX18P35713 384 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 TALDO1P37837 337 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 RPS26P62854 115 aaKnown RBP17.53■□□□□ 0.4
PSPC1-201ENST00000338910 MRPS21P82921 87 aaKnown RBP17.53■□□□□ 0.4
PSPC1-201ENST00000338910 POU4F3Q15319 338 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 SNAPC1Q16533 368 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 ENPP7Q6UWV6 458 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 CD300LDQ6UXZ3 194 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 OR2L8Q8NGY9 312 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 NEIL3Q8TAT5 605 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 RNFT2Q96EX2 444 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 SCMH1Q96GD3 660 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 MSANTD3Q96H12 275 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 WFDC6Q9BQY6 131 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 MRPS30Q9NP92 439 aaKnown RBP17.53■□□□□ 0.4
PSPC1-201ENST00000338910 TEX10Q9NXF1 929 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-201ENST00000338910 SPHK1Q9NYA1 384 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 ADAM30Q9UKF2 790 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 SCML1Q9UN30 329 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 USP34Q70CQ2 3546 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 COL4A2P08572 1712 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 PRSS38A1L453 326 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 PRR19A6NJB7 356 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 BCHEP06276 602 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 AK4P27144 223 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-201ENST00000338910 CDK5Q00535 292 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 COMMD7Q86VX2 200 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 NUDT13Q86X67 352 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 GPALPP1Q8IXQ4 340 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 NLNQ9BYT8 704 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 KLHL31Q9H511 634 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 PTTG3PQ9NZH4 202 aa17.53■□□□□ 0.4
PSPC1-201ENST00000338910 EXOSC1Q9Y3B2 195 aaKnown RBP17.53■□□□□ 0.4
PSPC1-201ENST00000338910 TRBV23OR9-2A0A075B6M9 112 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 PRODHO43272 600 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 LANCL1O43813 399 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 SH3BP5O60239 455 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 SLC19A2O60779 497 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 NME6O75414 186 aaPredicted RBP17.52■□□□□ 0.4
PSPC1-201ENST00000338910 EML2O95834 649 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 ELK1P19419 428 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 STOMP27105 288 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 TFF2Q03403 129 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 COX10Q12887 443 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 HSPB3Q12988 150 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 ZNF267Q14586 743 aaPredicted RBP17.52■□□□□ 0.4
PSPC1-201ENST00000338910 GRK1Q15835 563 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 AANATQ16613 207 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 CLLU1Q5K131 121 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 WASH2PQ6VEQ5 465 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 HDDC2Q7Z4H3 204 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 MARCH9Q86YJ5 346 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 UBL7Q96S82 380 aaPredicted RBP17.52■□□□□ 0.4
PSPC1-201ENST00000338910 AIFM2Q9BRQ8 373 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 HDHD2Q9H0R4 259 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 TBC1D29Q9UFV1 150 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 FBXW2Q9UKT8 454 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 IRGMA1A4Y4 181 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 C5orf58C9J3I9 102 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 UQCRC2P22695 453 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 MMP11P24347 488 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 BCL6P41182 706 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 CSTF1Q05048 431 aaKnown RBP17.52■□□□□ 0.4
PSPC1-201ENST00000338910 OR4C11Q6IEV9 310 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 ZER1Q7Z7L7 766 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 HORMAD2Q8N7B1 307 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms