RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 PDZD9Q8IXQ8 264 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 RLN3Q8WXF3 142 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 TBC1D20Q96BZ9 403 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 RHBDF1Q96CC6 855 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 GPR62Q9BZJ7 368 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 OR10A5Q9H207 317 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 OR10A2Q9H208 303 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 LIPT1Q9Y234 373 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 RAB3AP20336 220 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 OR52E8Q6IFG1 317 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 KIAA1211LQ6NV74 962 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 ZDHHC24Q6UX98 284 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 EID2Q8N6I1 236 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 C3orf58Q8NDZ4 430 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 CMASQ8NFW8 434 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-201ENST00000338508 TUBA1CQ9BQE3 449 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 GPN2Q9H9Y4 310 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-201ENST00000338508 BIN3Q9NQY0 253 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 CRYM-AS1A6NIL9 109 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 RDH16O75452 317 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 FAM163BP0C2L3 166 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 MC3RP41968 323 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 RPS5P46782 204 aaKnown RBP11.13□□□□□ -0.63
SHANK2-201ENST00000338508 GAB1Q13480 694 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 GPR50Q13585 617 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 PAFAH1B3Q15102 231 aaKnown RBP11.13□□□□□ -0.63
SHANK2-201ENST00000338508 GRAMD2AQ8IUY3 354 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 ZFP82Q8N141 532 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 ADAMTS10Q9H324 1103 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 TXNRD2Q9NNW7 524 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 PLEKHM1Q9Y4G2 1056 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 MYO5BQ9ULV0 1848 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 OR5H15A6NDH6 313 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 OR5H14A6NHG9 310 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 OR5H1A6NKK0 313 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 OR52A4PA6NMU1 304 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 SLC22A5O76082 557 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 GAAP10253 952 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 PAX6P26367 422 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 MTNR1AP48039 350 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 CSNK1A1P48729 337 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 PSAPL1Q6NUJ1 521 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 ABHD12BQ7Z5M8 362 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-201ENST00000338508 MGLLQ99685 303 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 INPP5KQ9BT40 448 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 TMEM59Q9BXS4 323 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 ULBP3Q9BZM4 244 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 RAB9BQ9NP90 201 aa11.13□□□□□ -0.63
SHANK2-201ENST00000338508 LOC105369274A0A096LPK9 316 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 SCAMP2O15127 329 aaKnown RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 PFKMP08237 780 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 CCL11P51671 97 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 GALNT2Q10471 571 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 ELAVL3Q14576 367 aaKnown RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 UPP1Q16831 310 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 OR4N4Q8N0Y3 316 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 SORBS1Q9BX66 1292 aaKnown RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 SMCO4Q9NRQ5 59 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 SACM1LQ9NTJ5 587 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 ANKMY1Q9P2S6 941 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 A0A0A6YYC8 382 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 I3L1I5 382 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 HTRA2O43464 458 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 HOXB5P09067 269 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 SLC14A1Q13336 389 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 ANKRD54Q6NXT1 300 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 ZNF440Q8IYI8 595 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 OR5AR1Q8NGP9 310 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 BAZ2AQ9UIF9 1905 aaKnown RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 IL2RGP31785 369 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 GNB1P62873 340 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 SLC5A8Q8N695 610 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 OR9Q2Q8NGE9 314 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 TMEM19Q96HH6 336 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 MRI1Q9BV20 369 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 IER3IP1Q9Y5U9 82 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 DCCP43146 1447 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 HBQ1P09105 142 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 P2RY2P41231 377 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 ZNF45Q02386 682 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 MANEAQ5SRI9 462 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 BAIAP2L2Q6UXY1 529 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 TCEAL8Q8IYN2 117 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 SYNPRQ8TBG9 265 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 PAAF1Q9BRP4 392 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 YTHDF1Q9BYJ9 559 aaKnown RBP11.12□□□□□ -0.63
SHANK2-201ENST00000338508 CHRDQ9H2X0 955 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 G3V3Y1 287 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 ZNF217O75362 1048 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 APBB3O95704 486 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 F3P13726 295 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 ARSAP15289 507 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 C5AR1P21730 350 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 PIP5KL1Q5T9C9 394 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 MICU1Q9BPX6 476 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 MYH13Q9UKX3 1938 aa11.12□□□□□ -0.63
SHANK2-201ENST00000338508 AQP7O14520 342 aa11.11□□□□□ -0.63
SHANK2-201ENST00000338508 BCAS2O75934 225 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms