RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SSPNQ14714 243 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 EXOC3L2Q2M3D2 409 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DESI1Q6ICB0 168 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TSPYL5Q86VY4 417 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 GALNT15Q8N3T1 639 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OR4C15Q8NGM1 316 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OR8K3Q8NH51 312 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OMA1Q96E52 524 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NRBF2Q96F24 287 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 IMMP1LQ96LU5 166 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NMNAT1Q9HAN9 279 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DLL3Q9NYJ7 618 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ACAD8Q9UKU7 415 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NTNG1Q9Y2I2 539 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 LOC101059948A0A1B0GTJ6 334 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TMEM200CA6NKL6 621 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 WWP2O00308 870 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 DLGAP1O14490 977 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 AP3D1O14617 1153 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TSPAN2O60636 221 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ABCB7O75027 752 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ZFAND5O76080 213 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 UTS2O95399 124 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ALPLP05186 524 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CELA2AP08217 269 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CYP4B1P13584 511 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 RBMS1P29558 406 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 KRT20P35900 424 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NRG3P56975 720 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PLAURQ03405 335 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 FGFBP1Q14512 234 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 COLEC12Q5KU26 742 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NDUFAF7Q7L592 441 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TMPRSS7Q7RTY8 843 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PPP1R32Q7Z5V6 425 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 OR5L2Q8NGL0 311 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ELP5Q8TE02 316 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PHF10Q8WUB8 498 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CNOT9Q92600 299 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PRRC1Q96M27 445 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 MCHR1Q99705 422 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 RBM4BQ9BQ04 359 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 FNDC11Q9BVV2 318 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 RBM4Q9BWF3 364 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 GPR87Q9BY21 358 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 HOXD1Q9GZZ0 328 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 UBQLN4Q9NRR5 601 aa13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CDV3Q9UKY7 258 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-201ENST00000338399 AHCTF1Q8WYP5 2266 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PTPRZ1P23471 2315 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 C21orf140B9A014 251 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 HS6ST1O60243 411 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 GFRA3O60609 400 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ZNF354AO60765 605 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 H1F0P07305 194 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PRG2P13727 222 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 UQCRBP14927 111 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 LIMS1P48059 325 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 HSPA13P48723 471 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ZNF136P52737 540 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 HMGA2P52926 109 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PPP2R2BQ00005 443 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 EXT1Q16394 746 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 C6orf52Q5T4I8 152 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TAGAPQ8N103 731 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ALPK1Q96QP1 1244 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 DEFB126Q9BYW3 111 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 GABARAPL1Q9H0R8 117 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 AP4B1Q9Y6B7 739 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 EXPH5Q8NEV8 1989 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NSG1A0A0A6YYJ2 146 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 SERINC4A6NH21 518 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CDRT15L2A8MXV6 281 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TERTO14746 1132 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ICOSLGO75144 302 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 OXSR1O95747 527 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 HPGDP15428 266 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ACADSP16219 412 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TAS2R41P59536 307 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 KLHL26Q53HC5 615 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 FGD3Q5JSP0 725 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ENTPD8Q5MY95 495 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PLAG1Q6DJT9 500 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 GATSQ8NAP1 163 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ZNF527Q8NB42 609 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PIK3C3Q8NEB9 887 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 GIPC3Q8TF64 312 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ARSGQ96EG1 525 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NAF1Q96HR8 494 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 DHRS1Q96LJ7 313 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ZBTB20Q9HC78 741 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ZNF160Q9HCG1 818 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 SMPD3Q9NY59 655 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 USE1Q9NZ43 259 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NPFFR2Q9Y5X5 522 aa13.57□□□□□ -0.24
CDK5RAP3-201ENST00000338399 MRPS18BQ9Y676 258 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms