RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PHF11Q9UIL8 331 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 TRBV4-1A0A0J9YWV2 114 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 CIB4A0PJX0 185 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 PRSS38A1L453 326 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 GRXCR2A6NFK2 248 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 POM121CA8CG34 1229 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 B4DXG7 233 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 FABP7O15540 132 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 EMC8O43402 210 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 PROM1O43490 865 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 LCMT2O60294 686 aaKnown RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 RHCEP18577 417 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 CXCR1P25024 350 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 AHRP35869 848 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 DBPQ10586 325 aaPredicted RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF77Q15935 545 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 CHRDL2Q6WN34 429 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 HDDC2Q7Z4H3 204 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 KLBQ86Z14 1044 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 SAMD14Q8IZD0 417 aaPredicted RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 PROKR2Q8NFJ6 384 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 CDS1Q92903 461 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 POP5Q969H6 163 aaKnown RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF566Q969W8 418 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 MYADMQ96S97 322 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 SPATA9Q9BWV2 254 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 EXO5Q9H790 373 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 MKKSQ9NPJ1 570 aaPredicted RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 DZANK1Q9NVP4 752 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF226Q9NYT6 803 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 CD207Q9UJ71 328 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 TBC1D24Q9ULP9 559 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 SESN1Q9Y6P5 492 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 ATRXP46100 2492 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 LOC100509620A0A075B734 347 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 OTOL1A6NHN0 477 aaPredicted RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 KHDRBS3O75525 346 aaKnown RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 KRT33AO76009 404 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 SLCO2B1O94956 709 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 GNSP15586 552 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 DDOSTP39656 456 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 MAZP56270 477 aaKnown RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF91Q05481 1191 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 RBBP4Q09028 425 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 IRF3Q14653 427 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 NSDHLQ15738 373 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 KLHL22Q53GT1 634 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 PIP5KL1Q5T9C9 394 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 UNC5DQ6UXZ4 953 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 GPAT4Q86UL3 456 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 RASGRP3Q8IV61 690 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 OR5T3Q8NGG3 340 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 CREB3L4Q8TEY5 395 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 MRPL48Q96GC5 212 aaKnown RBP6.08□□□□□ -1.44
HMG20A-201ENST00000336216 SAMD8Q96LT4 415 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 TRIM2Q9C040 744 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 SAP130Q9H0E3 1048 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 MVB12BQ9H7P6 319 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 TBC1D29Q9UFV1 150 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 GNG8Q9UK08 70 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 NEU3Q9UQ49 428 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 NAALAD2Q9Y3Q0 740 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 PCDHGB2Q9Y5G2 931 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 PCDHGB1Q9Y5G3 927 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 OR51B4Q9Y5P0 310 aa6.08□□□□□ -1.44
HMG20A-201ENST00000336216 SOX1O00570 391 aaPredicted RBP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 PLPP1O14494 284 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 CSO75390 466 aaKnown RBP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 EGFP01133 1207 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 KIR2DL3P43628 341 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 ARRB1P49407 418 aaPredicted RBP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 RPS25P62851 125 aaKnown RBP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 PUM1Q14671 1186 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 RPE65Q16518 533 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 AKIRIN2Q53H80 203 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF385BQ569K4 471 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 Q6ZNB5 142 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 PTOV1Q86YD1 416 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 CPOQ8IVL8 374 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF676Q8N7Q3 588 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 CHST4Q8NCG5 386 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 GALNT11Q8NCW6 608 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 LSM14AQ8ND56 463 aaKnown RBP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 ALG14Q96F25 216 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 HSPA12BQ96MM6 686 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 EPYCQ99645 322 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 ZFYVE21Q9BQ24 234 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 TTYH1Q9H313 450 aaPredicted RBP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 TMEM185BQ9H7F4 350 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 EVA1BQ9NVM1 165 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 ACTR10Q9NZ32 417 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 GPR34Q9UPC5 381 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 SH2B3Q9UQQ2 575 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 KLK4Q9Y5K2 254 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 H0YIV9 168 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 SCDO00767 359 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 HRGP04196 525 aa6.07□□□□□ -1.44
HMG20A-201ENST00000336216 TP53P04637 393 aaPredicted RBP6.07□□□□□ -1.44
HMG20A-201ENST00000336216 CSF3P09919 207 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms