RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 C19orf24Q9BVV8 132 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 FUNDC2Q9BWH2 189 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 MRPL13Q9BYD1 178 aaKnown RBP1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 LRRC2Q9BYS8 371 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 SLC25A39Q9BZJ4 359 aaPredicted RBP1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 NMNAT2Q9BZQ4 307 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 POLR1EQ9GZS1 481 aaKnown RBP1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 CXXC4Q9H2H0 198 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 TM9SF3Q9HD45 589 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 ACOXLQ9NUZ1 547 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 NMRK1Q9NWW6 199 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 TECRQ9NZ01 308 aaKnown RBP1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 AIPL1Q9NZN9 384 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 EIF3KQ9UBQ5 218 aaKnown RBP1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 SEC14L4Q9UDX3 406 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 PRODH2Q9UF12 536 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 PTBP2Q9UKA9 531 aaKnown RBP1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 FOXJ3Q9UPW0 622 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 KLHDC2Q9Y2U9 406 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 OR1A2Q9Y585 309 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 NSD2O96028 1365 aa1.72□□□□□ -2.13
CBX3P1-201ENST00000325243 SF3B1O75533 1304 aaKnown RBP eCLIP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 RAD54L2Q9Y4B4 1467 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 GSAPA4D1B5 854 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 RNF222A6NCQ9 220 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 MFSD2BA6NFX1 497 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 ANKRD30BLA7E2S9 258 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 SGK1O00141 431 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 LGALS8O00214 317 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 MAPK13O15264 365 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 SURF6O75683 361 aaKnown RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 NEBLO76041 1014 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 TM7SF2O76062 418 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 OR4F21O95013 312 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 TXNDC12O95881 172 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 UGT2B4P06133 528 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 SFTPBP07988 381 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 RRASP10301 218 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 TOP1P11387 765 aaKnown RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PSG2P11465 335 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PSMB1P20618 241 aaKnown RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 ZP3P21754 424 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 FCARP24071 287 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 TMOD1P28289 359 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PTGFRP43088 359 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 SLC6A8P48029 635 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 SSTP61278 116 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 SPIBQ01892 262 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 TNFRSF17Q02223 184 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 LRRC63Q05C16 580 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 MRPL28Q13084 256 aaKnown RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 BTG3Q14201 252 aaPredicted RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 MEF2DQ14814 521 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PRR4Q16378 134 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PDK4Q16654 411 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 CCDC14Q49A88 953 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 KCTD21Q4G0X4 260 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 CFAP157Q5JU67 520 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 ACER2Q5QJU3 275 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 RABGAP1LQ5R372 815 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 C1orf189Q5VU69 101 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 IL23RQ5VWK5 629 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PMF1Q6P1K2 205 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 SLC39A4Q6P5W5 647 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 LHFPL4Q7Z7J7 247 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 SLC22A16Q86VW1 577 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 CCDC197Q8NCU1 140 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 STEAP2Q8NFT2 490 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 OR56B2PQ8NGI1 322 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 TFB1MQ8WVM0 346 aaKnown RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PCED1BQ96HM7 432 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 FICDQ9BVA6 458 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 GANQ9H2C0 597 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 VCX2Q9H322 139 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 VPS37BQ9H9H4 285 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 Q9HAA7 133 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 MEAF6Q9HAF1 191 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 HPS4Q9NQG7 708 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 HOMER3Q9NSC5 361 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PLEK2Q9NYT0 353 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 COX16Q9P0S2 106 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 P2RX2Q9UBL9 471 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 CTNNA3Q9UI47 895 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 MRTO4Q9UKD2 239 aaKnown RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 CLEC4AQ9UMR7 237 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 DIMT1Q9UNQ2 313 aaKnown RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 B9D1Q9UPM9 204 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 ERVK-19Q9WJR5 959 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 MRPS2Q9Y399 296 aaKnown RBP1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 CHD4Q14839 1912 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 PARD3Q8TEW0 1356 aa1.71□□□□□ -2.14
CBX3P1-201ENST00000325243 KIF7Q2M1P5 1343 aa1.7□□□□□ -2.14
CBX3P1-201ENST00000325243 SYNRGQ9UMZ2 1314 aa1.7□□□□□ -2.14
CBX3P1-201ENST00000325243 XKRY2A2RUG3 117 aa1.7□□□□□ -2.14
CBX3P1-201ENST00000325243 TRABD2BA6NFA1 517 aa1.7□□□□□ -2.14
CBX3P1-201ENST00000325243 CCDC169A6NNP5 214 aa1.7□□□□□ -2.14
CBX3P1-201ENST00000325243 H3BMH7 237 aa1.7□□□□□ -2.14
CBX3P1-201ENST00000325243 BOLA2-SMG1P6H3BVE0 249 aa1.7□□□□□ -2.14
CBX3P1-201ENST00000325243 MAGEB3O15480 346 aa1.7□□□□□ -2.14
CBX3P1-201ENST00000325243 TBX19O60806 448 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms