RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 OR2A14Q96R47 310 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 AKAP7Q9P0M2 348 aaPredicted RBP14.33□□□□□ -0.12
VARS2-201ENST00000321897 SH3D21A4FU49 640 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 CSO75390 466 aaKnown RBP14.33□□□□□ -0.12
VARS2-201ENST00000321897 IFNGP01579 166 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 TFP02787 698 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 GPX2P18283 190 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 KIR2DL3P43628 341 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 SRP9P49458 86 aaKnown RBP14.33□□□□□ -0.12
VARS2-201ENST00000321897 EIF2B5Q13144 721 aaKnown RBP14.33□□□□□ -0.12
VARS2-201ENST00000321897 SMAD2Q15796 467 aaKnown RBP14.33□□□□□ -0.12
VARS2-201ENST00000321897 SWI5Q1ZZU3 235 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 TMEM215Q68D42 235 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 TMEM150AQ86TG1 271 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 ZBTB44Q8NCP5 570 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 PJA1Q8NG27 643 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 PHOSPHO1Q8TCT1 267 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 SGTBQ96EQ0 304 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 ELL3Q9HB65 397 aaPredicted RBP14.33□□□□□ -0.12
VARS2-201ENST00000321897 TRIM36Q9NQ86 728 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 ATXN7L1Q9ULK2 861 aaPredicted RBP14.33□□□□□ -0.12
VARS2-201ENST00000321897 RASD1Q9Y272 281 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 LRRN3E7EW58 273 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 PLPP1O14494 284 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 VEGFDO43915 354 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 OR12D2P58182 307 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 MESP2Q0VG99 397 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 OAFQ86UD1 273 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 OR4K13Q8NH42 304 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 PATE1Q8WXA2 126 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 ISG20Q96AZ6 181 aaKnown RBP14.32□□□□□ -0.12
VARS2-201ENST00000321897 ST6GAL2Q96JF0 529 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 OR2M4Q96R27 311 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 ZBP1Q9H171 429 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 LRRN3Q9H3W5 708 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 GNG8Q9UK08 70 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 EP300Q09472 2414 aaPredicted RBP14.32□□□□□ -0.12
VARS2-201ENST00000321897 DUXAA6NLW8 204 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 OR2AT4A6NND4 320 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 KLK8O60259 260 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 CSF3P09919 207 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 ZNF888P0CJ79 500 aaPredicted RBP14.32□□□□□ -0.12
VARS2-201ENST00000321897 ADH7P40394 386 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 PSPHP78330 225 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 SCGB2B2Q4G0G5 96 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 FAM122CQ6P4D5 195 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 FAM220AQ7Z4H9 259 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 PTOV1Q86YD1 416 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 FOXRED2Q8IWF2 684 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 OR8J2Q8NGG1 315 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 MOSPD2Q8NHP6 518 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 ZFAND1Q8TCF1 268 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 FOXN4Q96NZ1 517 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 RETREG1Q9H6L5 497 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 QPCTLQ9NXS2 382 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 SLC23A1Q9UHI7 598 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 COPS3Q9UNS2 423 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 PCDHGA2Q9Y5H1 932 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 SCN2AQ99250 2005 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 MCIDASD6RGH6 385 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 C11orf98E9PRG8 122 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 JUNDP17535 347 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 PKLRP30613 574 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 CCR6P51684 374 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 LBX1P52954 281 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 P2RY14Q15391 338 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 SF3A2Q15428 464 aaKnown RBP14.32□□□□□ -0.12
VARS2-201ENST00000321897 SPAG16Q8N0X2 631 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 OR6T1Q8NGN1 323 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 TRMT10AQ8TBZ6 339 aaKnown RBP14.32□□□□□ -0.12
VARS2-201ENST00000321897 CREB3L1Q96BA8 519 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 LRIG1Q96JA1 1093 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 NDC1Q9BTX1 674 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 THSD1Q9NS62 852 aa14.32□□□□□ -0.12
VARS2-201ENST00000321897 H0YIV9 168 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 PRAMEF4O60810 478 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 BMP8BP34820 402 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 EIF1AXP47813 144 aaKnown RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 AP3S2P59780 193 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 IRF4Q15306 451 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 GXYLT1Q4G148 440 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 PRAMEF9Q5VWM5 478 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 BMP8AQ7Z5Y6 402 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 CCDC36Q8IYA8 594 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 GPR135Q8IZ08 494 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 FATE1Q969F0 183 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 PEX11GQ96HA9 241 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 C1QTNF6Q9BXI9 259 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 PPA2Q9H2U2 334 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 SRA1Q9HD15 236 aaKnown RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 PCDHB16Q9NRJ7 776 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 CALML5Q9NZT1 146 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ATG4BQ9Y4P1 393 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 FAAHO00519 579 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 LRRTM2O43300 516 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 FAUP35544 74 aaKnown RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 HENMT1Q5T8I9 393 aaKnown RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 IRAK1BP1Q5VVH5 260 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 SMAP2Q8WU79 429 aaPredicted RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 CDS1Q92903 461 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms