RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 AIFM2Q9BRQ8 373 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 POLR2J3Q9H1A7 115 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 NTNG1Q9Y2I2 539 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 SPIN1Q9Y657 262 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 PRKAR1AP10644 381 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 ELAVL4P26378 380 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 KIR2DL1P43626 348 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 AVPR1BP47901 424 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 MAP4K2Q12851 820 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 PLEKHM3Q6ZWE6 761 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 TRIM69Q86WT6 500 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 ZFP41Q8N8Y5 198 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 OR1E3Q8WZA6 343 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 TMEM43Q9BTV4 400 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 P2RX2Q9UBL9 471 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 REV1Q9UBZ9 1251 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 APOBEC3BQ9UH17 382 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 A0A0A6YYD5 115 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 CHP2O43745 196 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 CHRM4P08173 479 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 PPP2R1BP30154 601 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 RFX3P48380 749 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 PUS10Q3MIT2 529 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 DEFB134Q4QY38 66 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 CLEC12AQ5QGZ9 265 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF770Q6IQ21 691 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 MZT2BQ6NZ67 158 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 IQCHQ86VS3 1027 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 COMMD7Q86VX2 200 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 IL17RCQ8NAC3 791 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 PROKR2Q8NFJ6 384 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 SIPA1Q96FS4 1042 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 FNDC11Q9BVV2 318 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 DDX31Q9H8H2 851 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 ENTPD4Q9Y227 616 aa14.54□□□□□ -0.08
SHROOM1-201ENST00000319854 ORC5O43913 435 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 HCN1O60741 890 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 SYPP08247 313 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 HSD17B2P37059 387 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 INSL4Q14641 139 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 AANATQ16613 207 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 CRTC2Q53ET0 693 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 C6orf132Q5T0Z8 1188 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 CDH24Q86UP0 819 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 KCNJ15Q99712 375 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 TRAF4Q9BUZ4 470 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 DPCDQ9BVM2 203 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 FAIM2Q9BWQ8 316 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 C1QTNF6Q9BXI9 259 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 C1QTNF2Q9BXJ5 285 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 CACNA1IQ9P0X4 2223 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 RPS10-NUDT3A0A1W2PQS6 291 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 PRSS38A1L453 326 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 LANCL1O43813 399 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 MPZL2O60487 215 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 PVRP15151 417 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 ATP5A1P25705 553 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 SSTR2P30874 369 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 NTSR1P30989 418 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 XKP51811 444 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 SIM1P81133 766 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 HYAL1Q12794 435 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 FGFBP1Q14512 234 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 KLHL22Q53GT1 634 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 ABHD17CQ6PCB6 329 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 PODNL1Q6PEZ8 512 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 OR11H7Q8NGC8 314 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 SLC9A6Q92581 669 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 KIAA1143Q96AT1 154 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 KCTD7Q96MP8 289 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 GPR52Q9Y2T5 361 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 SHISA3A0PJX4 238 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 CPSF4LA6NMK7 179 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 MAN2B1O00754 1011 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 TLX2O43763 284 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 CLEC3AO75596 197 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 HMGA2P52926 109 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 KIAA1161Q6NSJ0 714 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF782Q6ZMW2 699 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 VRK2Q86Y07 508 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 A4GALTQ9NPC4 353 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 PCDHGB7Q9Y5F8 929 aa14.53□□□□□ -0.08
SHROOM1-201ENST00000319854 DSPPQ9NZW4 1301 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 CH25HO95992 272 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 PAHP00439 452 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 RAF1P04049 648 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF888P0CJ79 500 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 CD79BP40259 229 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 KCNJ5P48544 419 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 PPM1FP49593 454 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 SNRPGP62308 76 aaKnown RBP14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 FABP5Q01469 135 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF57Q68EA5 555 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 CASP12Q6UXS9 341 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 B3GLCTQ6Y288 498 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 UBE2Q1Q7Z7E8 422 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 LHFPL5Q8TAF8 219 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 GATAD2BQ8WXI9 593 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 OTULINQ96BN8 352 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF354BQ96LW1 612 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms