RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 LRFN1Q9P244 771 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 DSPPQ9NZW4 1301 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 CLDN24A6NM45 220 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 NPIPB9F8W1W9 429 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 G3V3Y1 287 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 M0QX08 132 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 OXSR1O95747 527 aaPredicted RBP20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 SERPINA1P01009 418 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 CCL3P10147 92 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 EFR3AQ14156 821 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 LINC00303Q3SY05 128 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 LRRC23Q53EV4 343 aaPredicted RBP20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 PDZK1Q5T2W1 519 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 VRK2Q86Y07 508 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 METTL25Q8N6Q8 603 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 ZNF614Q8N883 585 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 GATSQ8NAP1 163 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 GRHL3Q8TE85 626 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 UGT2B28Q9BY64 529 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 MTHFD2LQ9H903 347 aaPredicted RBP20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 POLE3Q9NRF9 147 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 DCAF13Q9NV06 445 aaKnown RBP20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 CHCHD2Q9Y6H1 151 aaPredicted RBP20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 CNTRLQ7Z7A1 2325 aa20.56■□□□□ 0.88
CCDC85B-201ENST00000312579 C2orf72A6NCS6 295 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 HS6ST1O60243 411 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 NEURL1O76050 574 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 CD97P48960 835 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 ATP12AP54707 1039 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 ARG2P78540 354 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 OR1C1Q15619 314 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 COL28A1Q2UY09 1125 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 PRAMEF20Q5VT98 475 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 SLC30A8Q8IWU4 369 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 EID3Q8N140 333 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 SMYD1Q8NB12 490 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 OR10Q1Q8NGQ4 319 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 SPPL2AQ8TCT8 520 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 TAMM41Q96BW9 452 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 SEPHS2Q99611 448 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 HES7Q9BYE0 225 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 GALNT9Q9HCQ5 603 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 SH2D2AQ9NP31 389 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 OLAHQ9NV23 265 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 PCDHGA10Q9Y5H3 936 aa20.55■□□□□ 0.88
CCDC85B-201ENST00000312579 CACNA1GO43497 2377 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 OR5H15A6NDH6 313 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 HNRNPRO43390 633 aaKnown RBP20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 ITGB2P05107 769 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 FAM87AP0C7U9 286 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 KDELR2P33947 212 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 EVI2BP34910 448 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 GCKP35557 465 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 CASRP41180 1078 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 FAM98BQ52LJ0 330 aaKnown RBP20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 INTS11Q5TA45 600 aaKnown RBP20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 PRAMEF8Q5VWM4 474 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 PRAMEF7Q5VXH5 474 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 IGFL2Q6UWQ7 119 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 RTL4Q6ZR62 310 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 MARCH3Q86UD3 253 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 ABHD17AQ96GS6 310 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 PKP2Q99959 881 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 UBQLN4Q9NRR5 601 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 RPS6KA6Q9UK32 745 aa20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 SAMD4AQ9UPU9 718 aaKnown RBP20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 PCDHGA9Q9Y5G4 932 aaKnown RBP20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 GPC6Q9Y625 555 aaPredicted RBP20.54■□□□□ 0.88
CCDC85B-201ENST00000312579 AGAP5A6NIR3 686 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 MKRN2OSH3BPM6 223 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 SCO2O43819 266 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 FADS1O60427 444 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 BCAS1O75363 584 aaPredicted RBP20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 TIPRLO75663 272 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 TBXA2RP21731 343 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 VHLP40337 213 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 CHRNB3Q05901 458 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 ENPP6Q6UWR7 440 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 CCDC80Q76M96 950 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 LILRA2Q8N149 483 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 POGLUT1Q8NBL1 392 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 OR52P1PQ8NH57 321 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 NRG4Q8WWG1 115 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 TTC9Q92623 222 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 HAS2Q92819 552 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 TMCO6Q96DC7 493 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 TRIM45Q9H8W5 580 aaPredicted RBP20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 RIMS3Q9UJD0 308 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 CNOT11Q9UKZ1 510 aaKnown RBP20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 EML6Q6ZMW3 1958 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 A0A0G2JMM0 328 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 A0A1W2PPB8 328 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 A0A1W2PRS3 328 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 KIR3DP1A8MWS1 328 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 ADAM10O14672 748 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 TP53I11O14683 189 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 TPST1O60507 370 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 PRKD3O94806 890 aa20.53■□□□□ 0.88
CCDC85B-201ENST00000312579 MFN2O95140 757 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms