RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 OR14L1PQ8NHC6 308 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 GOT1L1Q8NHS2 421 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 ZFP90Q8TF47 636 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 ITLN2Q8WWU7 325 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 MAL2Q969L2 176 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 DNAJA3Q96EY1 480 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 ZNF317Q96PQ6 595 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 G6PC3Q9BUM1 346 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 TBL1XR1Q9BZK7 514 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 UCK2Q9BZX2 261 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 PAIP1Q9H074 479 aaKnown RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 DUSP22Q9NRW4 184 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 FAM120CQ9NX05 1096 aaKnown RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 TAS2R10Q9NYW0 307 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 BTNL2Q9UIR0 455 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 A0A1B0GVC2 190 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 TGDSO95455 350 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 CHRM4P08173 479 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 DPP4P27487 766 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 CHRNEQ04844 493 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 PMPCAQ10713 525 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 SNTB1Q13884 538 aaKnown RBP10.92□□□□□ -0.66
SCFD1-201ENST00000311943 TBCELQ5QJ74 424 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 PDZK1Q5T2W1 519 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 ANXA8L1Q5VT79 327 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 LIX1LQ8IVB5 337 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 UBQLNLQ8IYU4 475 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 KIRREL3Q8IZU9 778 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 FADS6Q8N9I5 356 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 NAXEQ8NCW5 288 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 SFXN5Q8TD22 340 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 NEURL3Q96EH8 262 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 DMRTA2Q96SC8 542 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 CCDC28BQ9BUN5 200 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 ACKR4Q9NPB9 350 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 VAPAQ9P0L0 249 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 CARD8Q9Y2G2 431 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 FAM234BA2RU67 622 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 NPIPB9F8W1W9 429 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 AQP7O14520 342 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 PRRG2O14669 202 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 UGT2B17O75795 530 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 CBR3O75828 277 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 DDX5P17844 614 aaKnown RBP10.92□□□□□ -0.66
SCFD1-201ENST00000311943 DCTP40126 519 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 SUCLG1P53597 346 aaKnown RBP10.92□□□□□ -0.66
SCFD1-201ENST00000311943 NUP107P57740 925 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 ZNF117Q03924 483 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 RCAN2Q14206 197 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 SELPLGQ14242 412 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.92□□□□□ -0.66
SCFD1-201ENST00000311943 FLYWCH1Q4VC44 716 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 TYW3Q6IPR3 259 aaKnown RBP10.92□□□□□ -0.66
SCFD1-201ENST00000311943 TMEM81Q6P7N7 255 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 MRGPRGQ86SM5 289 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 SPDL1Q96EA4 605 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 STACQ99469 402 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 ZBTB18Q99592 522 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 FAM107BQ9H098 131 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 TMEM185BQ9H7F4 350 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 MED4Q9NPJ6 270 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 ARMCX1Q9P291 453 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 ZNF337Q9Y3M9 751 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 CSMD1Q96PZ7 3565 aa10.92□□□□□ -0.66
SCFD1-201ENST00000311943 HEATR5AQ86XA9 2040 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 DCHS2Q6V1P9 2916 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 NDUFB5O43674 189 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 EFNA2O43921 213 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 SUSD5O60279 629 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 IL6P05231 212 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 IFI6P09912 130 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 ESRRAP11474 423 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-201ENST00000311943 TBXA2RP21731 343 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 GFRA1P56159 465 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 CLDN20P56880 219 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 RBPJQ06330 500 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 SNTA1Q13424 505 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 KLHL26Q53HC5 615 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 VASNQ6EMK4 673 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 VPS37AQ8NEZ2 397 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 OR4K17Q8NGC6 315 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 PHOSPHO1Q8TCT1 267 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 SMPDL3BQ92485 455 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 ROPN1LQ96C74 230 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 WDYHV1Q96HA8 205 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 SLC39A3Q9BRY0 314 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 TPT1P8Q9HAU6 139 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 NCOA6Q14686 2063 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-201ENST00000311943 ALG1L2C9J202 215 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 CYP7B1O75881 506 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 H6PDO95479 791 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 ANP32DO95626 131 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 ELAVL4P26378 380 aaKnown RBP10.91□□□□□ -0.66
SCFD1-201ENST00000311943 SHC1P29353 583 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 CAPRIN1Q14444 709 aaKnown RBP10.91□□□□□ -0.66
SCFD1-201ENST00000311943 DPY19L1Q2PZI1 675 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 GPAT3Q53EU6 434 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 ZNF787Q6DD87 383 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 HEPHL1Q6MZM0 1159 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms