RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 UBQLN4Q9NRR5 601 aa20.78■□□□□ 0.92
IRF3-201ENST00000309877 TMCC3Q9ULS5 477 aa20.78■□□□□ 0.92
IRF3-201ENST00000309877 HS3ST3B1Q9Y662 390 aa20.78■□□□□ 0.92
IRF3-201ENST00000309877 IGHV1-45A0A0A0MS14 117 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 DLGAP1O14490 977 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 TM4SF5O14894 197 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 ZFAND5O76080 213 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 THRBP10828 461 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 LCN1P31025 176 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 TAS2R41P59536 307 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 HOXC5Q00444 222 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 MED21Q13503 144 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 MICAQ29983 383 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 NHSL2Q5HYW2 709 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 RANBP3LQ86VV4 465 aaPredicted RBP20.77■□□□□ 0.92
IRF3-201ENST00000309877 PIK3C3Q8NEB9 887 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 OR8K3Q8NH51 312 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 ZNF570Q96NI8 536 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 ALPK1Q96QP1 1244 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 ADOQ96SZ5 270 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 MCHR1Q99705 422 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 LIN28AQ9H9Z2 209 aaKnown RBP20.77■□□□□ 0.92
IRF3-201ENST00000309877 CTPS2Q9NRF8 586 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 CCDC88CQ9P219 2028 aa20.77■□□□□ 0.92
IRF3-201ENST00000309877 CCNB2O95067 398 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 UTS2O95399 124 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 SNAP29O95721 258 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 LIMS1P48059 325 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 FGFBP1Q14512 234 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 BTBD16Q32M84 506 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 ANKRD34AQ69YU3 496 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 PLEKHM3Q6ZWE6 761 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 MARCH9Q86YJ5 346 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 CMIPQ8IY22 773 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 OR10G2Q8NGC3 310 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 THAP3Q8WTV1 239 aaPredicted RBP20.77■□□□□ 0.91
IRF3-201ENST00000309877 OMA1Q96E52 524 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 DHRS1Q96LJ7 313 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 RDH12Q96NR8 316 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 PRR14Q9BWN1 585 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 POLR1BQ9H9Y6 1135 aa20.77■□□□□ 0.91
IRF3-201ENST00000309877 CPSF4LA6NMK7 179 aaKnown RBP20.76■□□□□ 0.91
IRF3-201ENST00000309877 SCDO00767 359 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 ABCB7O75027 752 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 COX6A1P12074 109 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 IGFBP5P24593 272 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 ABCD3P28288 659 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 RAD23AP54725 363 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 RPS18P62269 152 aaKnown RBP20.76■□□□□ 0.91
IRF3-201ENST00000309877 GABREP78334 506 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 MERTKQ12866 999 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 EXT1Q16394 746 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 DCST1Q5T197 706 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 DHRSXQ8N5I4 330 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 CYGBQ8WWM9 190 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 OIT3Q8WWZ8 545 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 ADI1Q9BV57 179 aa20.76■□□□□ 0.91
IRF3-201ENST00000309877 SERINC4A6NH21 518 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 STMND1H3BQB6 276 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 DENRO43583 198 aaKnown RBP20.75■□□□□ 0.91
IRF3-201ENST00000309877 RAD1O60671 282 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 TPST2O60704 377 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 GKN3PP0CG01 181 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 FUT4P22083 530 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 RBMS1P29558 406 aaKnown RBP20.75■□□□□ 0.91
IRF3-201ENST00000309877 DAPP51397 102 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 IL1RL1Q01638 556 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 DNASE1L3Q13609 305 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 SSPNQ14714 243 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 RFX4Q33E94 735 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 ZIK1Q3SY52 487 aaPredicted RBP20.75■□□□□ 0.91
IRF3-201ENST00000309877 ENTPD8Q5MY95 495 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 KIRREL2Q6UWL6 708 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 CNOT9Q92600 299 aaKnown RBP20.75■□□□□ 0.91
IRF3-201ENST00000309877 DEFB126Q9BYW3 111 aa20.75■□□□□ 0.91
IRF3-201ENST00000309877 TRBV4-1A0A0J9YWV2 114 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 A0A1W2PRQ8 180 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 C21orf140B9A014 251 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 TSPAN2O60636 221 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 RPSAP08865 295 aaKnown RBP20.74■□□□□ 0.91
IRF3-201ENST00000309877 ANXA8P13928 327 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 ELAVL4P26378 380 aaKnown RBP20.74■□□□□ 0.91
IRF3-201ENST00000309877 OTX2P32243 289 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 DLSTP36957 453 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 STAT5AP42229 794 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 ZNF136P52737 540 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 PNLIPRP2P54317 469 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 EPS8Q12929 822 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 DGCR6Q14129 220 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 KLHL26Q53HC5 615 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 KDM4DQ6B0I6 523 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 NDUFAF7Q7L592 441 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 TSPYL5Q86VY4 417 aaPredicted RBP20.74■□□□□ 0.91
IRF3-201ENST00000309877 GRAMD2AQ8IUY3 354 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 OFCC1Q8IZS5 231 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 GALNT15Q8N3T1 639 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 TFAP2CQ92754 450 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 GPR87Q9BY21 358 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 FLRT3Q9NZU0 649 aa20.74■□□□□ 0.91
IRF3-201ENST00000309877 TMEFF2Q9UIK5 374 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms