RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TMEFF2Q9UIK5 374 aaPredicted RBP6.43□□□□□ -1.38
PTCD2-201ENST00000308077 RAB26Q9ULW5 256 aa6.43□□□□□ -1.38
PTCD2-201ENST00000308077 A4GNTQ9UNA3 340 aa6.43□□□□□ -1.38
PTCD2-201ENST00000308077 LRCH1Q9Y2L9 728 aa6.43□□□□□ -1.38
PTCD2-201ENST00000308077 IFT52Q9Y366 437 aa6.43□□□□□ -1.38
PTCD2-201ENST00000308077 NBEAQ8NFP9 2946 aa6.43□□□□□ -1.38
PTCD2-201ENST00000308077 CCDC187A0A096LP49 1063 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 SPAARA0A1B0GVQ0 90 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 SYNDIG1LA6NDD5 238 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 FRG2CA6NGY1 282 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 TTC36A6NLP5 189 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 NPIPB9F8W1W9 429 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 TNFRSF11BO00300 401 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 KLF7O75840 302 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 HPRP00739 348 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 THBS1P07996 1170 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 GUSBP08236 651 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 FTH1P19P0C7X4 201 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 JMJD7P0C870 316 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 UBTFL6P0CB48 400 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 NID1P14543 1247 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 IL7RP16871 459 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PPICP45877 212 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 HSPA13P48723 471 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 DAPP51397 102 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 HOXC5Q00444 222 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 NCF4Q15080 339 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 LIN52Q52LA3 116 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 C3orf38Q5JPI3 329 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PDZK1Q5T2W1 519 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 MRPL2Q5T653 305 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PAPD4Q6PIY7 484 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CPEB2Q7Z5Q1 589 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CYP4Z1Q86W10 505 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 LSRQ86X29 649 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF441Q8N8Z8 693 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 METTL21AQ8WXB1 218 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 EFHD2Q96C19 240 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 SDCCAG3Q96C92 435 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 NRBF2Q96F24 287 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 DHRS1Q96LJ7 313 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 GAL3ST4Q96RP7 486 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 RBM4BQ9BQ04 359 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 DDA1Q9BW61 102 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 RBM4Q9BWF3 364 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 SEMA4CQ9C0C4 833 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 WWTR1Q9GZV5 400 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 SMPD3Q9NY59 655 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 FLRT3Q9NZU0 649 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PDP1Q9P0J1 537 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 GPN3Q9UHW5 284 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 NXT1Q9UKK6 140 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PPIEQ9UNP9 301 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 SLC9A8Q9Y2E8 581 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 NTNG1Q9Y2I2 539 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 OR10H1Q9Y4A9 318 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PCDHGA10Q9Y5H3 936 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 EXPH5Q8NEV8 1989 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 TRBV4-1A0A0J9YWV2 114 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 C2orf92A0A1B0GVN3 265 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CDC14CA4D256 554 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PCDH17O14917 1159 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 DENRO43583 198 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 FOXD2O60548 495 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 MITFO75030 526 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 SEC24DO94855 1032 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 DBIP07108 87 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CYC1P08574 325 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 THRBP10828 461 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 DRD5P21918 477 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF136P52737 540 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 HMGA2P52926 109 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 MERTKQ12866 999 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 FOXD4Q12950 439 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PIN1Q13526 163 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 LARS2Q15031 903 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PCOLCEQ15113 449 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF141Q15928 474 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 ZIK1Q3SY52 487 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 RNF220Q5VTB9 566 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 KDM4DQ6B0I6 523 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 DESI1Q6ICB0 168 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 C6orf15Q6UXA7 325 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 MARCH9Q86YJ5 346 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CHERPQ8IWX8 916 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PRR22Q8IZ63 422 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 B3GNT7Q8NFL0 401 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 TFAP2CQ92754 450 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PMM1Q92871 262 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 ARSGQ96EG1 525 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 LCORQ96JN0 433 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 MBOAT4Q96T53 435 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 ZPBPQ9BS86 351 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 FUZQ9BT04 418 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 ADI1Q9BV57 179 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 OSBPL11Q9BXB4 747 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 LIN28AQ9H9Z2 209 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 NMNAT1Q9HAN9 279 aaPredicted RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CTPS2Q9NRF8 586 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms