RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PLA2G2CQ5R387 149 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 MRPL2Q5T653 305 aaKnown RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 ARHGAP40Q5TG30 622 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 RHBDD2Q6NTF9 364 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 KCTD8Q6ZWB6 473 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 DEPDC4Q8N2C3 294 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 BPIFB6Q8NFQ5 453 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 TOR1AIP2Q8NFQ8 470 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 FAM81AQ8TBF8 368 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 PTPMT1Q8WUK0 201 aaPredicted RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 SGCDQ92629 289 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 SLC38A4Q969I6 547 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 UBE2FQ969M7 185 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 TMIGD2Q96BF3 282 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 PRR14Q9BWN1 585 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 YIPF2Q9BWQ6 316 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 ARRDC1-AS1Q9H2J1 176 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 DUSP21Q9H596 190 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 Q9N2J8 555 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 MKKSQ9NPJ1 570 aaPredicted RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 CTPS2Q9NRF8 586 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 SIDT1Q9NXL6 827 aaKnown RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 PRODH2Q9UF12 536 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 TPRKBQ9Y3C4 175 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 CEPT1Q9Y6K0 416 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 ASH1LQ9NR48 2969 aaKnown RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 A0A087WUU8 490 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 NPIPB9F8W1W9 429 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 XPNPEP2O43895 674 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 FMO6PO60774 539 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 TP53P04637 393 aaPredicted RBP10.99□□□□□ -0.65
TRIM40-205ENST00000307859 TNNI3P19429 210 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 RORAP35398 523 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 KRT20P35900 424 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 CSNK2BP67870 215 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 PLAURQ03405 335 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 COX10Q12887 443 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 TARDBPQ13148 414 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF141Q15928 474 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 ZBED5Q49AG3 693 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 FLYWCH1Q4VC44 716 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 XAF1Q6GPH4 301 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 PLEKHM3Q6ZWE6 761 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 COX15Q7KZN9 410 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 GPR141Q7Z602 305 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 ZER1Q7Z7L7 766 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 RANBP3LQ86VV4 465 aaPredicted RBP10.99□□□□□ -0.65
TRIM40-205ENST00000307859 GRAMD2AQ8IUY3 354 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 NLGN4XQ8N0W4 816 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 SPARTQ8N0X7 666 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 ZSCAN1Q8NBB4 408 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 RCBTB1Q8NDN9 531 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 OR4N2Q8NGD1 307 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 RHOXF1Q8NHV9 184 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 IFI44Q8TCB0 444 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 TSLPQ969D9 159 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 CCDC74BQ96LY2 380 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 TUBA1CQ9BQE3 449 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 ITPAQ9BY32 194 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 ARMC7Q9H6L4 198 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 POLR1BQ9H9Y6 1135 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 SCN3BQ9NY72 215 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF226Q9NYT6 803 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 AASSQ9UDR5 926 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 TESQ9UGI8 421 aaKnown RBP10.99□□□□□ -0.65
TRIM40-205ENST00000307859 NTNG1Q9Y2I2 539 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 FRYQ5TBA9 3013 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 SPEGQ15772 3267 aa10.99□□□□□ -0.65
TRIM40-205ENST00000307859 IGLV3-12A0A075B6K2 115 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SYNDIG1LA6NDD5 238 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 MRPS14O60783 128 aaKnown RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 THY1P04216 161 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 IGKV3-11P04433 115 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 CEACAM1P13688 526 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 CSRP1P21291 193 aaKnown RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 DRD5P21918 477 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 TTKP33981 857 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 GSSP48637 474 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 DUSP3P51452 185 aaPredicted RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SLC37A1P57057 533 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 HOXC5Q00444 222 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 PMS2P3Q13401 168 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 ELAVL1Q15717 326 aaKnown RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 DECR1Q16698 335 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 MINDY4Q4G0A6 757 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 C1orf189Q5VU69 101 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SLX4IPQ5VYV7 408 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 GDF7Q7Z4P5 450 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SLITRK4Q8IW52 837 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 TMEM151BQ8IW70 566 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 ACOT11Q8WXI4 607 aaPredicted RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SLC41A3Q96GZ6 507 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SENP5Q96HI0 755 aaPredicted RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 OR6C1Q96RD1 312 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 NODALQ96S42 347 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 G6PC3Q9BUM1 346 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 YIPF3Q9GZM5 350 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 TGIF2Q9GZN2 237 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms