RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 OR52E2Q8NGJ4 325 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 TANGO2Q6ICL3 276 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 CLEC20AQ6ZU45 233 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 SPARTQ8N0X7 666 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 CHAC2Q8WUX2 184 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 METTL2AQ96IZ6 378 aaKnown RBP12.48□□□□□ -0.41
AFF1-201ENST00000307808 SUSD3Q96L08 255 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 RAB3DO95716 219 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 EIF4EP06730 217 aaKnown RBP12.48□□□□□ -0.41
AFF1-201ENST00000307808 RAB40ALP0C0E4 278 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 SGSHP51688 502 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 ARHGAP1Q07960 439 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 TAF9Q16594 264 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 ECM1Q16610 540 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 SFT2D3Q587I9 215 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 PAN3Q58A45 887 aaKnown RBP12.48□□□□□ -0.41
AFF1-201ENST00000307808 CYB5D2Q8WUJ1 264 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 RAB40AQ8WXH6 277 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 OR2M2Q96R28 347 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 MKRN2Q9H000 416 aaKnown RBP12.48□□□□□ -0.41
AFF1-201ENST00000307808 MYBPHLA2RUH7 354 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 FXYD4P59646 89 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 ZNF805Q5CZA5 627 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 USP51Q70EK9 711 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 OR10R2Q8NGX6 335 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 ASB17Q8WXJ9 295 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 ZNF486Q96H40 463 aaPredicted RBP12.48□□□□□ -0.41
AFF1-201ENST00000307808 RNF32Q9H0A6 362 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 ZDHHC18Q9NUE0 388 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 SERPINA5P05154 406 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 SFRP5Q5T4F7 317 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 PLXDC1Q8IUK5 500 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 GCNT2Q8N0V5 402 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 TTTY10Q9BZA0 68 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 TMEM233B4DJY2 109 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 TYRP14679 529 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 NFATC3Q12968 1075 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 BLOC1S3Q6QNY0 202 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 ASRGL1Q7L266 308 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 CBY1Q9Y3M2 126 aa12.48□□□□□ -0.41
AFF1-201ENST00000307808 CLDN7O95471 211 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 POU3F4P49335 361 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 ZNF546Q86UE3 836 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 MIB2Q96AX9 1013 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 C4AP0C0L4 1744 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 C4BP0C0L5 1744 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 MROH1Q8NDA8 1641 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 RAB6AP20340 208 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 RFC2P35250 354 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 UBE2KP61086 200 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 CYP27C1Q4G0S4 372 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 CATSPEREQ5SY80 951 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 MRPL21Q7Z2W9 205 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 LOC285095A0A1B0GVY8 99 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 B4DXG7 233 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 EIF3FO00303 357 aaPredicted RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 MSTNO14793 375 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 EPHA1P21709 976 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 EFNA3P52797 238 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 ELAVL3Q14576 367 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 PAFAH1B3Q15102 231 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 PRAMEF8Q5VWM4 474 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 PRAMEF7Q5VXH5 474 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 C15orf54Q8N8G6 183 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 CWH43Q9H720 699 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 PIGVQ9NUD9 493 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 NLKQ9UBE8 527 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 PHF3Q92576 2039 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 SCAMP2O15127 329 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 ZDHHC11BP0C7U3 371 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 GPR4P46093 362 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 DHPSP49366 369 aaPredicted RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 C1orf74Q96LT6 269 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 NTPCRQ9BSD7 190 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 SPO11Q9Y5K1 396 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 ATRNL1Q5VV63 1379 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 A0A1W2PPK0 400 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 ADARB1P78563 741 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 HYAL2Q12891 473 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 HES5Q5TA89 166 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 OR9I1Q8NGQ6 314 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 WDR20Q8TBZ3 569 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 DPF1Q92782 380 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 CMSS1Q9BQ75 279 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 OR11A1Q9GZK7 315 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 DNAJB11Q9UBS4 358 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 GJD2Q9UKL4 321 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 SHANK1Q9Y566 2161 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 LCMT2O60294 686 aaKnown RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 SRPX2O60687 465 aaPredicted RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 GDF10P55107 478 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 GALNT2Q10471 571 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 METAP1DQ6UB28 335 aaPredicted RBP12.47□□□□□ -0.41
AFF1-201ENST00000307808 TMEM107Q6UX40 140 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 HIST2H3AQ71DI3 136 aa12.47□□□□□ -0.41
AFF1-201ENST00000307808 PLPP5Q8NEB5 264 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms