RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 POU3F2P20265 443 aaPredicted RBP23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 WDR4P57081 412 aaKnown RBP23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 EEFSECP57772 596 aaKnown RBP23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 FBXL19-AS1Q494R0 122 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 POMZP3Q6PJE2 187 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 ARSKQ6UWY0 536 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 MISPQ8IVT2 679 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 MEIOBQ8N635 442 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 ZNF559Q9BR84 538 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 ACBD3Q9H3P7 528 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 PNPOQ9NVS9 261 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 THAP1Q9NVV9 213 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 GPATCH2Q9NW75 528 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 ABCA12Q86UK0 2595 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 RNASET2O00584 256 aaKnown RBP23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 RCBTB2O95199 551 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 CAPN3P20807 821 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 ATP6V1C1P21283 382 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 UQCRC1P31930 480 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 DLX5P56178 289 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 MAGOHP61326 146 aaKnown RBP23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 HBA1P69905 142 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 MYBPHQ13203 477 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 CCNJQ5T5M9 372 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 OR8J2Q8NGG1 315 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 RAB3IL1Q8TBN0 382 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 MGARPQ8TDB4 240 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 RNASE6Q93091 150 aaKnown RBP23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 TMBIM4Q9HC24 238 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 CLCF1Q9UBD9 225 aa23.91■■□□□ 1.42
CDKN2A-201ENST00000304494 A0A1W2PQD3 144 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 SOAT1P35610 550 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 ATG16L1Q676U5 607 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 OR4F3Q6IEY1 312 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 ZAR1Q86SH2 424 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 GRAMD2AQ8IUY3 354 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 UBQLNLQ8IYU4 475 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 ZNF527Q8NB42 609 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 SH3GL2Q99962 352 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 SFXN3Q9BWM7 321 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 HOXD1Q9GZZ0 328 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 FBXO34Q9NWN3 711 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 STOML1Q9UBI4 398 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 PCDHGB4Q9UN71 923 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 ZNF337Q9Y3M9 751 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 L3MBTL1Q9Y468 752 aa23.9■■□□□ 1.42
CDKN2A-201ENST00000304494 A0A087WZY1 265 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 OR2M5A3KFT3 312 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 HCRTR2O43614 444 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 GMFGO60234 142 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 CLNS1AP54105 237 aaKnown RBP23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 EEF1A1P68104 462 aaKnown RBP23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 DPY19L1Q2PZI1 675 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 ANXA8L1Q5VT79 327 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 EEF1A1P5Q5VTE0 462 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 OGFOD2Q6N063 350 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 GATSQ8NAP1 163 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 VPS37AQ8NEZ2 397 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 OR5AK3PQ8NH89 298 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 TESCQ96BS2 214 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 TLCD1Q96CP7 247 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 CSMD2Q7Z408 3487 aa23.89■■□□□ 1.41
CDKN2A-201ENST00000304494 EEF1E1-BLOC1S5C9J1V9 151 aa23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 EEF1E1O43324 174 aaKnown RBP23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 SNNO75324 88 aaPredicted RBP23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 DCST2Q5T1A1 773 aa23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 P4HA3Q7Z4N8 544 aa23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 CLECL1Q8IZS7 167 aa23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 OR5M1Q8NGP8 315 aa23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 ACTRT2Q8TDY3 377 aa23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 AP4B1Q9Y6B7 739 aa23.88■■□□□ 1.41
CDKN2A-201ENST00000304494 DUXAA6NLW8 204 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 TRPC5OSA6NMA1 111 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 SLCO1B7G3V0H7 640 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 H3BML4 177 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 HDAC3O15379 428 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 ZNF17P17021 662 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 KIR2DL3P43628 341 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 ZNF41P51814 821 aaPredicted RBP23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 AGFG1P52594 562 aaKnown RBP23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 TMEM44Q2T9K0 475 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 OR2A2Q6IF42 318 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 MTERF4Q7Z6M4 381 aaKnown RBP23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 LURAP1LQ8IV03 231 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 OR4A15Q8NGL6 344 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 INTS12Q96CB8 462 aaKnown RBP23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 OR7D2Q96RA2 312 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 VDAC3Q9Y277 283 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 KIAA1549Q9HCM3 1950 aa23.87■■□□□ 1.41
CDKN2A-201ENST00000304494 RNF103-CHMP3A0A140T963 221 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 PRSS51A0A1B0GVH4 220 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 SLC22A20A6NK97 555 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 FOXF2Q12947 444 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 CASP8Q14790 479 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 SPATA19Q7Z5L4 167 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 ZBTB8AQ96BR9 441 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 MANSC1Q9H8J5 431 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 JKAMPQ9P055 326 aa23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 INTS1Q8N201 2190 aaKnown RBP23.86■■□□□ 1.41
CDKN2A-201ENST00000304494 H3BNH8 94 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms