RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MTSS1LQ765P7 747 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 MARCH9Q86YJ5 346 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 NRMQ8IXM6 262 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 FAM26EQ8N5C1 309 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 OR14C36Q8NHC7 312 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 ADAMTS15Q8TE58 950 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 ZFPM2Q8WW38 1151 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 DDX31Q9H8H2 851 aaKnown RBP12.58□□□□□ -0.4
CTDP1-202ENST00000299543 ALPK3Q96L96 1907 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 MAN2B1O00754 1011 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 C1QBP02746 253 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 ASGR2P07307 311 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 HIST1H1TP22492 207 aaPredicted RBP12.58□□□□□ -0.4
CTDP1-202ENST00000299543 RAB28P51157 221 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 COX10Q12887 443 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 TNK1Q13470 666 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 CCNJQ5T5M9 372 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 ETFBKMTQ8IXQ9 262 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 BBS1Q8NFJ9 593 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 OR11H4Q8NGC9 324 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 OR52E1Q8NGJ3 308 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 PRRC1Q96M27 445 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 OR7D2Q96RA2 312 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 WACQ9BTA9 647 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 HDHD2Q9H0R4 259 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 SLC6A17Q9H1V8 727 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 PCDHGA9Q9Y5G4 932 aaKnown RBP12.58□□□□□ -0.4
CTDP1-202ENST00000299543 TRAV6A0A075B6T7 132 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 ZNF860A6NHJ4 632 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 FUT1P19526 365 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 ARHGDIBP52566 201 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 PER3P56645 1201 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 FABP5Q01469 135 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 FUT5Q11128 374 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 ARHGAP19Q14CB8 494 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 OCLNQ16625 522 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 SLC36A4Q6YBV0 504 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 CREB3L2Q70SY1 520 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 TMEFF1Q8IYR6 380 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 ZNF614Q8N883 585 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 OR10Z1Q8NGY1 313 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 SUN3Q8TAQ9 357 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 SLC25A46Q96AG3 418 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 ZNF707Q96C28 371 aaPredicted RBP12.57□□□□□ -0.4
CTDP1-202ENST00000299543 CHFRQ96EP1 664 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 GMEB2Q9UKD1 530 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 SLC27A6Q9Y2P4 619 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 ZNF780BQ9Y6R6 833 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 PLXNA2O75051 1894 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 ZC3H12DA2A288 527 aaKnown RBP12.57□□□□□ -0.4
CTDP1-202ENST00000299543 PIP5K1CO60331 668 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 HPGDSO60760 199 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 TRHRP34981 398 aaPredicted RBP12.57□□□□□ -0.4
CTDP1-202ENST00000299543 ANXA11P50995 505 aaKnown RBP12.57□□□□□ -0.4
CTDP1-202ENST00000299543 RPS7P62081 194 aaKnown RBP12.57□□□□□ -0.4
CTDP1-202ENST00000299543 PRR5P85299 388 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 IRF4Q15306 451 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 TMEM52BQ4KMG9 183 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 GDPGP1Q6ZNW5 385 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 OR51G2Q8NGK0 314 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 BBS10Q8TAM1 723 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 CREB3L4Q8TEY5 395 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 SECISBP2Q96T21 854 aaKnown RBP12.57□□□□□ -0.4
CTDP1-202ENST00000299543 MCHR1Q99705 422 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 KATNB1Q9BVA0 655 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 IGFLR1Q9H665 355 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 FANCFQ9NPI8 374 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 KLHL28Q9NXS3 571 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
CTDP1-202ENST00000299543 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 A0A0A6YYD5 115 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 PRODHO43272 600 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 LALBAP00709 142 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 DRD2P14416 443 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 MPIP34949 423 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 ZSWIM7Q19AV6 140 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 TEX261Q6UWH6 196 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 RDH10Q8IZV5 341 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 SLC16A11Q8NCK7 471 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 MORN4Q8NDC4 146 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 PIGXQ8TBF5 258 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 TMEM163Q8TC26 289 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 GIMAP1Q8WWP7 306 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 FGF13Q92913 245 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 BADQ92934 168 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 GIMAP5Q96F15 307 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 COX14Q96I36 57 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 KLHL15Q96M94 604 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 DCLRE1CQ96SD1 692 aaKnown RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 MED20Q9H944 212 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 NDRG2Q9UN36 371 aaKnown RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 PPIEQ9UNP9 301 aaKnown RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 U3KQ87 197 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 SNRNP200O75643 2136 aaKnown RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 CLEC3AO75596 197 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 ATP5A1P25705 553 aaKnown RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 HSD17B2P37059 387 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 ETV6P41212 452 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 GPR85P60893 370 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms