RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 APOFQ13790 326 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 CEACAM19Q7Z692 300 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 FAM160A2Q8N612 972 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 CNEP1R1Q8N9A8 125 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 GRPEL2Q8TAA5 225 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 MS4A8Q9BY19 250 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 PCDHGA6Q9Y5G7 932 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 TMEM202A6NGA9 273 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 ATF4P18848 351 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 CSNK1A1P48729 337 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 POU3F4P49335 361 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 EIF5AP63241 154 aaKnown RBP16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 NKX3-2P78367 333 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZMYND11Q15326 602 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 STK11Q15831 433 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 MICAQ29983 383 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 PRRC1Q96M27 445 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 SCP2D1Q9UJQ7 156 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 CAMK2AQ9UQM7 478 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 MT-ND2P03891 347 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 GKN3PP0CG01 181 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 CKMT1AP12532 417 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF16P17020 682 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 GCH1P30793 250 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 BCL2L15Q5TBC7 163 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF615Q8N8J6 731 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 A0A1W2PPC4 97 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 CD79AP11912 226 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 MAGEA3P43357 314 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 TSFMP43897 325 aaKnown RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 KCNJ10P78508 379 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 MLC1Q15049 377 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 TMEM53Q6P2H8 277 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 Q6ZNB5 142 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 METTL8Q9H825 291 aaKnown RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 NMNAT1Q9HAN9 279 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 MOV10Q9HCE1 1003 aaKnown RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 ENY2Q9NPA8 101 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 A0A1B0GX78 115 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 SH3D21A4FU49 640 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 POM121BA6NF01 834 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 CD3GP09693 182 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 MMP21Q8N119 569 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 ENDOVQ8N8Q3 282 aaKnown RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR13C3Q8NGS6 347 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 LRRC20Q8TCA0 184 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 TRPV4Q9HBA0 871 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 TMEM30AQ9NV96 361 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 FRS3O43559 492 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 PTGER1P34995 402 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 RBM34P42696 430 aaKnown RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 SPHARQ15513 63 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 TMEM178AQ8NBL3 297 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 WASH6PQ9NQA3 447 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 PVALBP20472 110 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 YOD1Q5VVQ6 348 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 LIPKQ5VXJ0 399 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 MISPQ8IVT2 679 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 CCDC74AQ96AQ1 378 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 CTRCQ99895 268 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 INIPQ9NRY2 104 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 H0Y8X5 98 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 DNAJB5O75953 348 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 LCATP04180 440 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 GLO1Q04760 184 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF404Q494X3 552 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 CCNJQ5T5M9 372 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 SBSNQ6UWP8 590 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 TSPYL5Q86VY4 417 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 VRK3Q8IV63 474 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 FAM118AQ9NWS6 357 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 MLXQ9UH92 298 aa16.61■□□□□ 0.25
CDC42EP3-201ENST00000295324 TRIM64A6NGJ6 449 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 ELK4P28324 431 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 CPOXP36551 454 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 PGFP49763 221 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 TMEM196Q5HYL7 178 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 ENKD1Q9H0I2 346 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 TMEM9BQ9NQ34 198 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 PLEKHM1Q9Y4G2 1056 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 VAMP1P23763 118 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 PRKXP51817 358 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 RNF175Q8N4F7 328 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 FRS2Q8WU20 508 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 C3orf30Q96M34 536 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 KLHL15Q96M94 604 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 ELF4Q99607 663 aaPredicted RBP16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 LOC102723532A0A0G2JNH3 316 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 CSNK1G2P78368 415 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 KLBQ86Z14 1044 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR1J4Q8NGS1 313 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 IFI44Q8TCB0 444 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 ACOT11Q8WXI4 607 aaPredicted RBP16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 WDR83Q9BRX9 315 aaKnown RBP16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 CFHR5Q9BXR6 569 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 DPAGT1Q9H3H5 408 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 SSC5DA1L4H1 1573 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 TARM1B6A8C7 271 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms