RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 HSD17B1P14061 328 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 RPE65Q16518 533 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 IL20RBQ6UXL0 311 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 CFAP77Q6ZQR2 320 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 NXF5Q9H1B4 397 aaKnown RBP16.28■□□□□ 0.2
SHANK1-201ENST00000293441 OR2S2Q9NQN1 319 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 MGAT4CQ9UBM8 478 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 SLC35A3Q9Y2D2 325 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 GABRR3A8MPY1 467 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 HMGN2P05204 90 aaKnown RBP16.28■□□□□ 0.2
SHANK1-201ENST00000293441 F3P13726 295 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 ZNF81P51508 661 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 PSPHP78330 225 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 MAT1AQ00266 395 aaKnown RBP16.28■□□□□ 0.2
SHANK1-201ENST00000293441 PAPOLGQ9BWT3 736 aaKnown RBP16.28■□□□□ 0.2
SHANK1-201ENST00000293441 TMEM168Q9H0V1 697 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 MEPEQ9NQ76 525 aaPredicted RBP16.28■□□□□ 0.2
SHANK1-201ENST00000293441 CUTCQ9NTM9 273 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 AGAP5A6NIR3 686 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 IVDP26440 423 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 CSNK1DP48730 415 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 AKR1C2P52895 323 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 CSNK2A1P68400 391 aaPredicted RBP16.28■□□□□ 0.2
SHANK1-201ENST00000293441 HOXC5Q00444 222 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 SMAD2Q15796 467 aaKnown RBP16.28■□□□□ 0.2
SHANK1-201ENST00000293441 LMNTD1Q8N9Z9 388 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 DKK3Q9UBP4 350 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 TMEM205Q6UW68 189 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 SCML4Q8N228 414 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 ARFGAP1Q8N6T3 406 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 LGALS12Q96DT0 336 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 SMOXQ9NWM0 555 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 ERVK13-1Q9NX77 482 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 PCDHGA7Q9Y5G6 932 aa16.28■□□□□ 0.2
SHANK1-201ENST00000293441 PRLP01236 227 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 CSNK1A1P48729 337 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 RAB15P59190 212 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 CCNJQ5T5M9 372 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 DCAF12Q5T6F0 453 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 C6orf89Q6UWU4 347 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 C3P1Q6ZMU1 363 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 SNIP1Q8TAD8 396 aaKnown RBP16.27■□□□□ 0.2
SHANK1-201ENST00000293441 ARRDC3Q96B67 414 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 TREX2Q9BQ50 279 aaPredicted RBP16.27■□□□□ 0.2
SHANK1-201ENST00000293441 USP3Q9Y6I4 520 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 SGSHP51688 502 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 TBRG1Q3YBR2 411 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 ENKD1Q9H0I2 346 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 ISPDA4D126 451 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 SCRG1O75711 98 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 C7P10643 843 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 FXYD4P59646 89 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 NKAIN2Q5VXU1 208 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 CPOQ8IVL8 374 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 KLHL15Q96M94 604 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 INSM2Q96T92 566 aaPredicted RBP16.27■□□□□ 0.2
SHANK1-201ENST00000293441 PLEK2Q9NYT0 353 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 DNAJB11Q9UBS4 358 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 CBLCQ9ULV8 474 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 MYO9BQ13459 2157 aa16.27■□□□□ 0.2
SHANK1-201ENST00000293441 WDPCPO95876 746 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 CD63P08962 238 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 MAP2K3P46734 347 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 ZNF480Q8WV37 535 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 OR4K3Q96R72 315 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 OR7D2Q96RA2 312 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 ALG8Q9BVK2 526 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 TP63Q9H3D4 680 aaPredicted RBP16.27■□□□□ 0.19
SHANK1-201ENST00000293441 LOC285095A0A1B0GVY8 99 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 ZBTB42B2RXF5 422 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 ZFAND5O76080 213 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 KDM1BQ8NB78 822 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 OR6C1Q96RD1 312 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 PHOX2BQ99453 314 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 MICAL3Q7RTP6 2002 aa16.27■□□□□ 0.19
SHANK1-201ENST00000293441 ANKRD30BLA7E2S9 258 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 AOAHP28039 575 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 ERVK-25P63136 954 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 FOXN4Q96NZ1 517 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 SLC6A16Q9GZN6 736 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 PENKP01210 267 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-201ENST00000293441 RPS5P46782 204 aaKnown RBP16.26■□□□□ 0.19
SHANK1-201ENST00000293441 TLDC1Q6P9B6 456 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 MYADMQ96S97 322 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 AP1M2Q9Y6Q5 423 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 FGF4P08620 206 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 CHRNEQ04844 493 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 RHEBQ15382 184 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 OR51Q1Q8NH59 317 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 SFXN5Q8TD22 340 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 SYNPO2LQ9H987 977 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 FAM86C1Q9NVL1 165 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 VSX1Q9NZR4 365 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-201ENST00000293441 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 I3L521 148 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 M0R233 179 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 CD40LGP29965 261 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 CSNK2A3Q8NEV1 391 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 ZNF443Q9Y2A4 671 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-201ENST00000293441 FAM230AA0A1W2PPH8 454 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms