RNA–Protein interactions for RNA: ENST00000292535.11

CUX1-201, Transcript of cut like homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUX1, Length 13,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-201ENST00000292535 LAPTM4AQ15012 233 aa8.83□□□□□ -1
CUX1-201ENST00000292535 SLC22A6Q4U2R8 563 aa8.83□□□□□ -1
CUX1-201ENST00000292535 STEAP3Q658P3 488 aa8.83□□□□□ -1
CUX1-201ENST00000292535 Q6ZSR6 202 aa8.83□□□□□ -1
CUX1-201ENST00000292535 C10orf71Q711Q0 1435 aa8.83□□□□□ -1
CUX1-201ENST00000292535 C12orf45Q8N5I9 185 aaPredicted RBP8.83□□□□□ -1
CUX1-201ENST00000292535 GDPD1Q8N9F7 314 aa8.83□□□□□ -1
CUX1-201ENST00000292535 ASCC1Q8N9N2 400 aaKnown RBP8.83□□□□□ -1
CUX1-201ENST00000292535 OR1J2Q8NGS2 313 aa8.83□□□□□ -1
CUX1-201ENST00000292535 SYT17Q9BSW7 474 aa8.83□□□□□ -1
CUX1-201ENST00000292535 RBM24Q9BX46 236 aaKnown RBP8.83□□□□□ -1
CUX1-201ENST00000292535 KLHL9Q9P2J3 617 aa8.83□□□□□ -1
CUX1-201ENST00000292535 AKAP12Q02952 1782 aa8.83□□□□□ -1
CUX1-201ENST00000292535 PCGF2P35227 344 aa8.83□□□□□ -1
CUX1-201ENST00000292535 ADARB1P78563 741 aaKnown RBP8.83□□□□□ -1
CUX1-201ENST00000292535 PEA15Q15121 130 aa8.83□□□□□ -1
CUX1-201ENST00000292535 ZDHHC24Q6UX98 284 aa8.83□□□□□ -1
CUX1-201ENST00000292535 ZNF681Q96N22 645 aa8.83□□□□□ -1
CUX1-201ENST00000292535 CCNL2Q96S94 520 aaPredicted RBP8.83□□□□□ -1
CUX1-201ENST00000292535 PEAK1Q9H792 1746 aa8.83□□□□□ -1
CUX1-201ENST00000292535 CXorf49A8MYA2 514 aaPredicted RBP8.83□□□□□ -1
CUX1-201ENST00000292535 H3BML4 177 aa8.83□□□□□ -1
CUX1-201ENST00000292535 HTRA2O43464 458 aaPredicted RBP8.83□□□□□ -1
CUX1-201ENST00000292535 PKLRP30613 574 aa8.83□□□□□ -1
CUX1-201ENST00000292535 DCAF7P61962 342 aa8.83□□□□□ -1
CUX1-201ENST00000292535 FIGLAQ6QHK4 219 aa8.83□□□□□ -1
CUX1-201ENST00000292535 LCTLQ6UWM7 567 aa8.83□□□□□ -1
CUX1-201ENST00000292535 TSPYL5Q86VY4 417 aaPredicted RBP8.83□□□□□ -1
CUX1-201ENST00000292535 COG8Q96MW5 612 aa8.83□□□□□ -1
CUX1-201ENST00000292535 BTBD2Q9BX70 525 aa8.83□□□□□ -1
CUX1-201ENST00000292535 A0A0U1RQK1 487 aa8.83□□□□□ -1
CUX1-201ENST00000292535 H2AFB2P0C5Z0 115 aa8.83□□□□□ -1
CUX1-201ENST00000292535 MEF2DQ14814 521 aa8.83□□□□□ -1
CUX1-201ENST00000292535 KIR2DS3Q14952 304 aa8.83□□□□□ -1
CUX1-201ENST00000292535 TECPR1Q7Z6L1 1165 aa8.83□□□□□ -1
CUX1-201ENST00000292535 PRR18Q8N4B5 295 aa8.83□□□□□ -1
CUX1-201ENST00000292535 MINDY1Q8N5J2 469 aa8.83□□□□□ -1
CUX1-201ENST00000292535 SGK3Q96BR1 496 aa8.83□□□□□ -1
CUX1-201ENST00000292535 MRGPRX2Q96LB1 330 aa8.83□□□□□ -1
CUX1-201ENST00000292535 LMF2Q9BU23 707 aaKnown RBP8.83□□□□□ -1
CUX1-201ENST00000292535 CHRDQ9H2X0 955 aa8.83□□□□□ -1
CUX1-201ENST00000292535 EVA1AQ9H8M9 152 aa8.83□□□□□ -1
CUX1-201ENST00000292535 GDE1Q9NZC3 331 aa8.83□□□□□ -1
CUX1-201ENST00000292535 C22orf42Q6IC83 251 aa8.82□□□□□ -1
CUX1-201ENST00000292535 PSMF1Q92530 271 aa8.82□□□□□ -1
CUX1-201ENST00000292535 IKZF4Q9H2S9 585 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CACNA1AO00555 2505 aa8.82□□□□□ -1
CUX1-201ENST00000292535 NID2Q14112 1375 aa8.82□□□□□ -1
CUX1-201ENST00000292535 MPIG6BO95866 241 aa8.82□□□□□ -1
CUX1-201ENST00000292535 F2P00734 622 aa8.82□□□□□ -1
CUX1-201ENST00000292535 ITGB7P26010 798 aa8.82□□□□□ -1
CUX1-201ENST00000292535 HOXC8P31273 242 aa8.82□□□□□ -1
CUX1-201ENST00000292535 ZFAND4Q86XD8 727 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CD207Q9UJ71 328 aa8.82□□□□□ -1
CUX1-201ENST00000292535 EEF1E1-BLOC1S5C9J1V9 151 aa8.82□□□□□ -1
CUX1-201ENST00000292535 RNF225M0QZC1 329 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 HEXAP06865 529 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CTXN1P60606 82 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CST6Q15828 149 aa8.82□□□□□ -1
CUX1-201ENST00000292535 ADAMTS19Q8TE59 1207 aa8.82□□□□□ -1
CUX1-201ENST00000292535 PEX11GQ96HA9 241 aa8.82□□□□□ -1
CUX1-201ENST00000292535 STEAP1Q9UHE8 339 aa8.82□□□□□ -1
CUX1-201ENST00000292535 MTCL1Q9Y4B5 1905 aaKnown RBP8.82□□□□□ -1
CUX1-201ENST00000292535 CD8B2A6NJW9 211 aa8.82□□□□□ -1
CUX1-201ENST00000292535 FAM155AB1AL88 458 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 WNT7AO00755 349 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CD8BP10966 210 aa8.82□□□□□ -1
CUX1-201ENST00000292535 SMYD5Q6GMV2 418 aa8.82□□□□□ -1
CUX1-201ENST00000292535 METTL2BQ6P1Q9 378 aaKnown RBP8.82□□□□□ -1
CUX1-201ENST00000292535 NAT6Q93015 286 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CNTNAP3BQ96NU0 1288 aa8.82□□□□□ -1
CUX1-201ENST00000292535 DPH2Q9BQC3 489 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 CNOT11Q9UKZ1 510 aaKnown RBP8.82□□□□□ -1
CUX1-201ENST00000292535 SPO11Q9Y5K1 396 aa8.82□□□□□ -1
CUX1-201ENST00000292535 A0A1W2PS29 197 aa8.82□□□□□ -1
CUX1-201ENST00000292535 PRPH2P23942 346 aa8.82□□□□□ -1
CUX1-201ENST00000292535 SFTPDP35247 375 aa8.82□□□□□ -1
CUX1-201ENST00000292535 SLC10A1Q14973 349 aa8.82□□□□□ -1
CUX1-201ENST00000292535 PCLAFQ15004 111 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CYP4V2Q6ZWL3 525 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 USP53Q70EK8 1073 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CREB3L2Q70SY1 520 aa8.82□□□□□ -1
CUX1-201ENST00000292535 ZFP82Q8N141 532 aa8.82□□□□□ -1
CUX1-201ENST00000292535 IQCF1Q8N6M8 205 aa8.82□□□□□ -1
CUX1-201ENST00000292535 OR8K5Q8NH50 307 aa8.82□□□□□ -1
CUX1-201ENST00000292535 RPS10P5Q9NQ39 176 aa8.82□□□□□ -1
CUX1-201ENST00000292535 TMEM184BQ9Y519 407 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 GGT5P36269 586 aa8.82□□□□□ -1
CUX1-201ENST00000292535 TSACCQ96A04 125 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 SERINC2Q96SA4 455 aa8.82□□□□□ -1
CUX1-201ENST00000292535 IL23AQ9NPF7 189 aa8.82□□□□□ -1
CUX1-201ENST00000292535 POLE4Q9NR33 117 aa8.82□□□□□ -1
CUX1-201ENST00000292535 PLEK2Q9NYT0 353 aa8.82□□□□□ -1
CUX1-201ENST00000292535 SCN9AQ15858 1988 aa8.82□□□□□ -1
CUX1-201ENST00000292535 MED6O75586 246 aa8.82□□□□□ -1
CUX1-201ENST00000292535 SEMA4FO95754 770 aa8.82□□□□□ -1
CUX1-201ENST00000292535 NTSR1P30989 418 aa8.82□□□□□ -1
CUX1-201ENST00000292535 NKX6-1P78426 367 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 FAM69AQ5T7M9 428 aa8.82□□□□□ -1
CUX1-201ENST00000292535 CIDECQ96AQ7 238 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms