RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 C9orf40Q8IXQ3 194 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 ZNF420Q8TAQ5 688 aaPredicted RBP13.43□□□□□ -0.26
TRIM23-202ENST00000274327 CMKLR1Q99788 373 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 NIPSNAP1Q9BPW8 284 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 RIBC2Q9H4K1 309 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 TBCCD1Q9NVR7 557 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 SLC39A1Q9NY26 324 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 POFUT2Q9Y2G5 429 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 OR10H1Q9Y4A9 318 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 FRYLO94915 3013 aa13.43□□□□□ -0.26
TRIM23-202ENST00000274327 SH3PXD2BA1X283 911 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 OR6C76A6NM76 312 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 AP3D1O14617 1153 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 SLC5A2P31639 672 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 ATP12AP54707 1039 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 EMP2P54851 167 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 PSMD4P55036 377 aaKnown RBP13.42□□□□□ -0.26
TRIM23-202ENST00000274327 IL1RL1Q01638 556 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 NPRL3Q12980 569 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 KEAP1Q14145 624 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 FGD3Q5JSP0 725 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 ENTPD8Q5MY95 495 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 ZNF691Q5VV52 312 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 FAAH2Q6GMR7 532 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 GRAMD2AQ8IUY3 354 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 PRSS33Q8NF86 280 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 SLC7A13Q8TCU3 470 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 LCORQ96JN0 433 aaPredicted RBP13.42□□□□□ -0.26
TRIM23-202ENST00000274327 PITX2Q99697 317 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 MCHR1Q99705 422 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 PRR14Q9BWN1 585 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 POLR2J2Q9GZM3 115 aaKnown RBP13.42□□□□□ -0.26
TRIM23-202ENST00000274327 POLR2J3Q9H1A7 115 aaKnown RBP13.42□□□□□ -0.26
TRIM23-202ENST00000274327 NXF5Q9H1B4 397 aaKnown RBP13.42□□□□□ -0.26
TRIM23-202ENST00000274327 ANKRD19PQ9H560 264 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 AKIRIN1Q9H9L7 192 aaPredicted RBP13.42□□□□□ -0.26
TRIM23-202ENST00000274327 PARD6AQ9NPB6 346 aa13.42□□□□□ -0.26
TRIM23-202ENST00000274327 AKAP7Q9P0M2 348 aaPredicted RBP13.42□□□□□ -0.26
TRIM23-202ENST00000274327 PPIEQ9UNP9 301 aaKnown RBP13.42□□□□□ -0.26
TRIM23-202ENST00000274327 SAGE2PA6NJ88 616 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 CPSF4LA6NMK7 179 aaKnown RBP13.41□□□□□ -0.26
TRIM23-202ENST00000274327 C4orf47A7E2U8 309 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 TMX2-CTNND1H3BSU7 103 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 BCKDKO14874 412 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 TO15178 435 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 LRP3O75074 770 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 CYP7B1O75881 506 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 OR5F1O95221 314 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 IL33O95760 270 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 GASTP01350 101 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 CCNYL3P0C7X3 344 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 RFX3P48380 749 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 TAS2R41P59536 307 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 HOXC5Q00444 222 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 FGFBP1Q14512 234 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 PDZK1Q5T2W1 519 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 PODNL1Q6PEZ8 512 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 TMEM205Q6UW68 189 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ISLR2Q6UXK2 745 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 THAP5Q7Z6K1 395 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 C8orf59Q8N0T1 100 aaPredicted RBP13.41□□□□□ -0.26
TRIM23-202ENST00000274327 PARP8Q8N3A8 854 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 LINC00471Q8N535 108 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ZNF441Q8N8Z8 693 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 AQP11Q8NBQ7 271 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 NFAM1Q8NET5 270 aaPredicted RBP13.41□□□□□ -0.26
TRIM23-202ENST00000274327 OIT3Q8WWZ8 545 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 LMF1Q96S06 567 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 SEMA4CQ9C0C4 833 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ARMC7Q9H6L4 198 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 WDR54Q9H977 334 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.41□□□□□ -0.26
TRIM23-202ENST00000274327 COPS7AQ9UBW8 275 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 NDRG4Q9ULP0 352 aaKnown RBP13.41□□□□□ -0.26
TRIM23-202ENST00000274327 MGAT4BQ9UQ53 548 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 LOXL2Q9Y4K0 774 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 SPEGQ15772 3267 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 C2orf92A0A1B0GVN3 265 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 FMO6PO60774 539 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 BCAS1O75363 584 aaPredicted RBP13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ADAP00813 363 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ETV5P41161 510 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ST3GAL3Q11203 375 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 DECR1Q16698 335 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 TBC1D25Q3MII6 688 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ZBED5Q49AG3 693 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 PGBD2Q6P3X8 592 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 FAM198BQ6UWH4 519 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 ZNF517Q6ZMY9 492 aaPredicted RBP13.41□□□□□ -0.26
TRIM23-202ENST00000274327 PLEKHM3Q6ZWE6 761 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 SLCO6A1Q86UG4 719 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 FBLIM1Q8WUP2 373 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 METTL21AQ8WXB1 218 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 SLC35B4Q969S0 331 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 WDR77Q9BQA1 342 aaPredicted RBP13.41□□□□□ -0.26
TRIM23-202ENST00000274327 DGCR6LQ9BY27 220 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 STRADBQ9C0K7 418 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 CTPS2Q9NRF8 586 aa13.41□□□□□ -0.26
TRIM23-202ENST00000274327 GALNT8Q9NY28 637 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms