RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 BPIFB6Q8NFQ5 453 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 TMEM255BQ8WV15 326 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 CLIP3Q96DZ5 547 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 LOXL4Q96JB6 756 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 NXF5Q9H1B4 397 aaKnown RBP11.19□□□□□ -0.62
SDE2-201ENST00000272091 TRIM45Q9H8W5 580 aaPredicted RBP11.19□□□□□ -0.62
SDE2-201ENST00000272091 Q9N2J8 555 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 C11orf16Q9NQ32 467 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 NCOR1O75376 2440 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 WDR87Q6ZQQ6 2873 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 OR5F1O95221 314 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ZGLP1P0C6A0 271 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ZNF28P17035 718 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ACP1P24666 158 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 OMPP47874 163 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ESRRGP62508 458 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 TRAM2Q15035 370 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 CLPPQ16740 277 aaPredicted RBP11.19□□□□□ -0.62
SDE2-201ENST00000272091 NKAIN1Q4KMZ8 207 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 OR4C3Q8NH37 302 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 FAM81AQ8TBF8 368 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ANKRD19PQ9H560 264 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 SLC7A7Q9UM01 511 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 CEPT1Q9Y6K0 416 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ASCC3Q8N3C0 2202 aaKnown RBP11.19□□□□□ -0.62
SDE2-201ENST00000272091 FAM86C2PA6NEL3 165 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 SOX30O94993 753 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 PTNP21246 168 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 DUSP3P51452 185 aaPredicted RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 GPR143P51810 404 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 UGT2B15P54855 530 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 PMS2P3Q13401 168 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 ILKQ13418 452 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 FGFBP1Q14512 234 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.18□□□□□ -0.629e-7■■■■■ 34.6
SDE2-201ENST00000272091 RBM44Q6ZP01 1051 aaKnown RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 KCTD8Q6ZWB6 473 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 POGLUT1Q8NBL1 392 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 RHOXF1Q8NHV9 184 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 NR4A3Q92570 626 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 SLC24A3Q9HC58 644 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 PRODH2Q9UF12 536 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 EFCAB7A8K855 629 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 AP3D1O14617 1153 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 KHNYNO15037 678 aaKnown RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 KLF4O43474 513 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 CCDC159P0C7I6 412 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 FGF5P12034 268 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 ACAA2P42765 397 aaKnown RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 ST3GAL3Q11203 375 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 FAAH2Q6GMR7 532 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 DESI1Q6ICB0 168 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 GRAMD2AQ8IUY3 354 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 SPARTQ8N0X7 666 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 SLC46A1Q96NT5 459 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 SIGLEC11Q96RL6 698 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 ZNF223Q9UK11 482 aaPredicted RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 PCDHGA5Q9Y5G8 931 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 IGHV3-20A0A0C4DH32 117 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 VSTM2BA6NLU5 285 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 SLC35A2P78381 396 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 OR1Q1Q15612 314 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 DECR1Q16698 335 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 NDUFAF6Q330K2 333 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 EFHD2Q96C19 240 aaPredicted RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 PLA2G12AQ9BZM1 189 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 DSN1Q9H410 356 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 DUSP21Q9H596 190 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 RXFP3Q9NSD7 469 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 PCDHGB2Q9Y5G2 931 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 EXPH5Q8NEV8 1989 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 H3BSA7 217 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 CDX4O14627 284 aaPredicted RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 ABCB7O75027 752 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 LDOC1O95751 146 aaPredicted RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 CCL4P13236 92 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 PCMT1P22061 227 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 PPICP45877 212 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 CXCR4P61073 352 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 TOP3AQ13472 1001 aaPredicted RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 EBPQ15125 230 aaKnown RBP11.18□□□□□ -0.62
SDE2-201ENST00000272091 FNDC7Q5VTL7 733 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 C12orf73Q69YU5 71 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 PPP1R3BQ86XI6 285 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 FKBP10Q96AY3 582 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 NRSN2Q9GZP1 204 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 ERVK-18Q9QC07 812 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 CLCA3PQ9Y6N3 262 aa11.18□□□□□ -0.62
SDE2-201ENST00000272091 SEC16AO15027 2179 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 SMIM31A0A1B0GVY4 71 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 GRK6P43250 576 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 CNPY1Q3B7I2 92 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 ANKRD37Q7Z713 158 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 ZNF441Q8N8Z8 693 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 OR14A16Q8NHC5 309 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 POLR2J3Q9H1A7 115 aaKnown RBP11.17□□□□□ -0.62
SDE2-201ENST00000272091 CNIH4Q9P003 139 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 CFAP54Q96N23 3096 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 FRG2CA6NGY1 282 aa11.17□□□□□ -0.62
SDE2-201ENST00000272091 IDH2P48735 452 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms