RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TCEANCQ8N8B7 351 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 POGLUT1Q8NBL1 392 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 RCBTB1Q8NDN9 531 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 OR8D4Q8NGM9 314 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 MAFAQ8NHW3 353 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 CCDC74AQ96AQ1 378 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 Q96MT0 163 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 OR1F2PQ96R84 312 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 NUDT22Q9BRQ3 303 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 CDCA4Q9BXL8 241 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 OR10A5Q9H207 317 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 DSN1Q9H410 356 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 DHCR7Q9UBM7 475 aaKnown RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 TESQ9UGI8 421 aaKnown RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 GMEB2Q9UKD1 530 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 MMACHCQ9Y4U1 282 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 A0A1B0GTQ1 180 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 NPIPB9F8W1W9 429 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 PIP5K1CO60331 668 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 CDK4P11802 303 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF182P17025 639 aaPredicted RBP15.39■□□□□ 0.05
CCDC40-201ENST00000269318 ALAS2P22557 587 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 NR4A1P22736 598 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 TGFBR2P37173 567 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 PGDP52209 483 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 OR1Q1Q15612 314 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 PDZK1Q5T2W1 519 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 WDR88Q6ZMY6 472 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 RRM2BQ7LG56 351 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 GATAD2AQ86YP4 633 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 FAM26EQ8N5C1 309 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 ARMC7Q9H6L4 198 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 EVA1AQ9H8M9 152 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 TVP23BQ9NYZ1 205 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 DNAJC27Q9NZQ0 273 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 CACNA1EQ15878 2313 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 SDK1Q7Z5N4 2213 aa15.39■□□□□ 0.05
CCDC40-201ENST00000269318 ARID1BQ8NFD5 2236 aaPredicted RBP15.39■□□□□ 0.05
CCDC40-201ENST00000269318 IGKV3D-11A0A0A0MRZ8 115 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 A8MU76 341 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 M0R082 166 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 IFNA16P05015 189 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ADORA3P0DMS8 318 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 RFX3P48380 749 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 SMSP52788 366 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 SPCS2Q15005 226 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 MFSD4BQ5TF39 518 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 GRAMD2AQ8IUY3 354 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ZSCAN1Q8NBB4 408 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 PTPMT1Q8WUK0 201 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-201ENST00000269318 CNOT9Q92600 299 aaKnown RBP15.38■□□□□ 0.05
CCDC40-201ENST00000269318 PTCHD1Q96NR3 888 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ITPAQ9BY32 194 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF768Q9H5H4 540 aaKnown RBP15.38■□□□□ 0.05
CCDC40-201ENST00000269318 Q9N2J8 555 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 MYO15AQ9UKN7 3530 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ASXL3Q9C0F0 2248 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ADAMTS20P59510 1910 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 LY6G6EA0A0G2JKS1 128 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 PTHP01270 115 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 PNLIPP16233 465 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 STAT5AP42229 794 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 DSG2Q14126 1118 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF141Q15928 474 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 PLAG1Q6DJT9 500 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 SLC27A4Q6P1M0 643 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 P2RY8Q86VZ1 359 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 TEX47Q8TBZ9 253 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 SAP25Q8TEE9 199 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 GAB3Q8WWW8 586 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF501Q96CX3 271 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-201ENST00000269318 DUSP23Q9BVJ7 150 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF223Q9UK11 482 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-201ENST00000269318 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCDC40-201ENST00000269318 U3KQA8 63 aa15.38■□□□□ 0.05
CCDC40-201ENST00000269318 TTC36A6NLP5 189 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 C17orf105B2RV13 164 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 TLX2O43763 284 aaPredicted RBP15.37■□□□□ 0.05
CCDC40-201ENST00000269318 LIPAP38571 399 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 GPR4P46093 362 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 OCA2Q04671 838 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 PLK5Q496M5 336 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 QSOX2Q6ZRP7 698 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 BCDIN3DQ7Z5W3 292 aaKnown RBP15.37■□□□□ 0.05
CCDC40-201ENST00000269318 GPR135Q8IZ08 494 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 OR7G1Q8NGA0 311 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 OR4C6Q8NH72 309 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 C9orf43Q8TAL5 461 aaPredicted RBP15.37■□□□□ 0.05
CCDC40-201ENST00000269318 NDC1Q9BTX1 674 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 DNAJB12Q9NXW2 375 aaKnown RBP15.37■□□□□ 0.05
CCDC40-201ENST00000269318 IL20Q9NYY1 176 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 SUSD2Q9UGT4 822 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 VCANP13611 3396 aa15.37■□□□□ 0.05
CCDC40-201ENST00000269318 CDC42EP2O14613 210 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 DSCR3O14972 297 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ADAM11O75078 769 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 EFNA3P52797 238 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF91Q05481 1191 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 SQSTM1Q13501 440 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms