RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 B4DGG1 531 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 STX11O75558 287 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 LGI1O95970 557 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 STAT5AP42229 794 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 PUM1Q14671 1186 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTCF-201ENST00000264010 GDPGP1Q6ZNW5 385 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 BOLLQ8N9W6 283 aaKnown RBP15.25■□□□□ 0.03
CTCF-201ENST00000264010 IL17RCQ8NAC3 791 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 GPR32P1Q8NGA4 272 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 DYNC2LI1Q8TCX1 351 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 FAM46AQ96IP4 442 aaKnown RBP15.25■□□□□ 0.03
CTCF-201ENST00000264010 ZFP3Q96NJ6 502 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 FCRL4Q96PJ5 515 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 QRSL1Q9H0R6 528 aaKnown RBP15.25■□□□□ 0.03
CTCF-201ENST00000264010 PRDM7Q9NQW5 492 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 NLKQ9UBE8 527 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 GNB5O14775 395 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 P2RX3P56373 397 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 CAMK2BQ13554 666 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 ZNF658BQ4V348 819 aaPredicted RBP15.25■□□□□ 0.03
CTCF-201ENST00000264010 LIPKQ5VXJ0 399 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 APH1BQ8WW43 257 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 CNRIP1Q96F85 164 aaPredicted RBP15.25■□□□□ 0.03
CTCF-201ENST00000264010 KCTD7Q96MP8 289 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 APOBEC3BQ9UH17 382 aaKnown RBP15.25■□□□□ 0.03
CTCF-201ENST00000264010 CACNA1CQ13936 2221 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 UGT2B7P16662 529 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 PRKCAP17252 672 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 SSTR2P30874 369 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 MLLT10P55197 1068 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 LTB4RQ15722 352 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 CLPPQ16740 277 aaPredicted RBP15.24■□□□□ 0.03
CTCF-201ENST00000264010 C21orf62-AS1Q17RA5 79 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 FLYWCH1Q4VC44 716 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 STEAP3Q658P3 488 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 WDR53Q7Z5U6 358 aaPredicted RBP15.24■□□□□ 0.03
CTCF-201ENST00000264010 UBE3DQ7Z6J8 389 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 PARGQ86W56 976 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 DOK4Q8TEW6 326 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 CDS1Q92903 461 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 SLC41A3Q96GZ6 507 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 MCCC2Q9HCC0 563 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 TAS2R16Q9NYV7 291 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 ASB4Q9Y574 426 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 POM121CA8CG34 1229 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 TNFRSF10CO14798 259 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 IFNGP01579 166 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 RD3LP0DJH9 198 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 ZNF542PQ5EBM4 170 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 FAM205BPQ63HN1 556 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 MZT2AQ6P582 158 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 GPR155Q7Z3F1 870 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 KLHL36Q8N4N3 616 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 CD180Q99467 661 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 GTPBP2Q9BX10 602 aaKnown RBP15.24■□□□□ 0.03
CTCF-201ENST00000264010 COPZ2Q9P299 210 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 KCNN3Q9UGI6 736 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 STUB1Q9UNE7 303 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 RIIAD1A6NNX1 92 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 PROM1O43490 865 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 RCBTB2O95199 551 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 APOL3O95236 402 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 DBIP07108 87 aaKnown RBP15.24■□□□□ 0.03
CTCF-201ENST00000264010 CHRM4P08173 479 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 ZNF181Q2M3W8 571 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 SMARCD3Q6STE5 483 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 HSDL2Q6YN16 418 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 MEIOBQ8N635 442 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 KLHDC7BQ96G42 594 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 MRPL48Q96GC5 212 aaKnown RBP15.24■□□□□ 0.03
CTCF-201ENST00000264010 POLDIP3Q9BY77 421 aaKnown RBP15.24■□□□□ 0.03
CTCF-201ENST00000264010 CNIH4Q9P003 139 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 NDOR1Q9UHB4 597 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 CYP8B1Q9UNU6 501 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 UPK1BO75841 260 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 AK1P00568 194 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 FOSL1P15407 271 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 MTNR1AP48039 350 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 SHC2P98077 582 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 HYAL1Q12794 435 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 OXA1LQ15070 435 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 PRSS53Q2L4Q9 553 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 CCDC71Q8IV32 467 aaPredicted RBP15.24■□□□□ 0.03
CTCF-201ENST00000264010 PROKR2Q8NFJ6 384 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 OR2T33Q8NG76 320 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 ACOT11Q8WXI4 607 aaPredicted RBP15.24■□□□□ 0.03
CTCF-201ENST00000264010 OR5M11Q96RB7 305 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 IFT27Q9BW83 186 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 CDCA4Q9BXL8 241 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 MCOLN1Q9GZU1 580 aa15.24■□□□□ 0.03
CTCF-201ENST00000264010 PRAMEF26H0Y7S4 382 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 H0Y8X5 98 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 SMAD9O15198 467 aaKnown RBP15.23■□□□□ 0.03
CTCF-201ENST00000264010 CLEC2LP0C7M8 214 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 SLC2A2P11168 524 aaPredicted RBP15.23■□□□□ 0.03
CTCF-201ENST00000264010 MMP11P24347 488 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 GABRA3P34903 492 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 NUP62P37198 522 aaPredicted RBP15.23■□□□□ 0.03
CTCF-201ENST00000264010 GPR4P46093 362 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 C1orf61Q13536 156 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms