RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 POLE3Q9NRF9 147 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ABCG2Q9UNQ0 655 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 NTNG1Q9Y2I2 539 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 CACNA1AO00555 2505 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 J3KTA2 159 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 OIP5O43482 229 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 GMFGO60234 142 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 OXSR1O95747 527 aaPredicted RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 LGI1O95970 557 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 DBIP07108 87 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 FBXO45P0C2W1 286 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 RAP2AP10114 183 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 PRG2P13727 222 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 ANPEPP15144 967 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 SESN3P58005 492 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 CDC20Q12834 499 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 PPP1R8Q12972 351 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 AIMP2Q13155 320 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 CD226Q15762 336 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 NPTX1Q15818 432 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF141Q15928 474 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 IQCCQ4KMZ1 466 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 IFI44LQ53G44 452 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 KLHL26Q53HC5 615 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 MRPL2Q5T653 305 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 AP1ARQ63HQ0 302 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 AAGABQ6PD74 315 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 TSPYL5Q86VY4 417 aaPredicted RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 CARM1Q86X55 608 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 ZDHHC21Q8IVQ6 265 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 C10orf67Q8IYJ2 551 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 PAPD5Q8NDF8 572 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 OR10G3Q8NGC4 313 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 SLC22A8Q8TCC7 542 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 LZICQ8WZA0 190 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 PROX1Q92786 737 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 GATA6Q92908 595 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 HGDQ93099 445 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 VPS50Q96JG6 964 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF354BQ96LW1 612 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 FER1L6-AS2Q96M78 137 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 IP6K3Q96PC2 410 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 KLHDC3Q9BQ90 382 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 SPATA5L1Q9BVQ7 753 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 ING2Q9H160 280 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 CCDC86Q9H6F5 360 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 CTPS2Q9NRF8 586 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 UBQLN4Q9NRR5 601 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 ARMC1Q9NVT9 282 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 MRTO4Q9UKD2 239 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF232Q9UNY5 417 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
SNRNP40-201ENST00000263694 CHD8Q9HCK8 2581 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 LAMA5O15230 3695 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 OR6C70A6NIJ9 312 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF891A8MT65 544 aaPredicted RBP8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 SCO2O43819 266 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 TPST2O60704 377 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 ADAM11O75078 769 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 SEMA7AO75326 666 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 CYP7B1O75881 506 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 CAPNS1P04632 268 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 GUSBP08236 651 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 NID1P14543 1247 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 TBXA2RP21731 343 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 PRKAR1BP31321 381 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 SSR4P51571 173 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 CCL11P51671 97 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 PSMD4P55036 377 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 AP2B1P63010 937 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 RIPK1Q13546 671 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 ELOAQ14241 798 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 LARS2Q15031 903 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF791Q3KP31 576 aaPredicted RBP8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 LIN52Q52LA3 116 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 ACER2Q5QJU3 275 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 ZFP1Q6P2D0 407 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 DHRS4L2Q6PKH6 230 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 DEF8Q6ZN54 512 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 LINC00696Q6ZRV3 163 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 SPACA3Q8IXA5 215 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 BEST3Q8N1M1 668 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 GALNT16Q8N428 558 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 SLC5A8Q8N695 610 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 GOLM1Q8NBJ4 401 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 CLEC1AQ8NC01 280 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 OR6T1Q8NGN1 323 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 SNIP1Q8TAD8 396 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 GRHL3Q8TE85 626 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 ASB15Q8WXK1 588 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 SPACA9Q96E40 222 aaPredicted RBP8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 LHPPQ9H008 270 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 MAGIXQ9H6Y5 334 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 DCLRE1BQ9H816 532 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 RNPEPL1Q9HAU8 725 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 GALNT9Q9HCQ5 603 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 VNN3Q9NY84 501 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 PLA2G3Q9NZ20 509 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 STMN3Q9NZ72 180 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 RHCGQ9UBD6 479 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms