RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PRR14Q9BWN1 585 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 MAN2C1Q9NTJ4 1040 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 FOXJ2Q9P0K8 574 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 AP3D1O14617 1153 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 BCAS1O75363 584 aaPredicted RBP21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 CCNYL3P0C7X3 344 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 LCN1P31025 176 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 RNF144AP50876 292 aaPredicted RBP21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 RAD23AP54725 363 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 PSPHP78330 225 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 PCOLCEQ15113 449 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 ZSWIM7Q19AV6 140 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 TMEM164Q5U3C3 297 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 HSDL2Q6YN16 418 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 CACTIN-AS1Q8N1I8 211 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 SLC5A8Q8N695 610 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 ATG16L2Q8NAA4 619 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 CYGBQ8WWM9 190 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 TP53INP1Q96A56 240 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 CNBD2Q96M20 576 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 MCHR1Q99705 422 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 HOXD1Q9GZZ0 328 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 UBAP1Q9NZ09 502 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 KIF17Q9P2E2 1029 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 ORC6Q9Y5N6 252 aa21.1■□□□□ 0.97
SMARCB1-201ENST00000263121 CDC14CA4D256 554 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 MITFO75030 526 aaPredicted RBP21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 CCNB2O95067 398 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 RAB40ALP0C0E4 278 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 ANXA8P13928 327 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 CSRP1P21291 193 aaKnown RBP21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 HOXC5Q00444 222 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 FGD3Q5JSP0 725 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 ENTPD8Q5MY95 495 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 ZNF770Q6IQ21 691 aaPredicted RBP21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 CMIPQ8IY22 773 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 SLC34A3Q8N130 599 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 ZNF614Q8N883 585 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 OR8K3Q8NH51 312 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 NUBPLQ8TB37 319 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 CT55Q8WUE5 264 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 FEVQ99581 238 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 TSPAN2O60636 221 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 PRG2P13727 222 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 FOLR3P41439 243 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 TAS2R41P59536 307 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 SEC23BQ15437 767 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 KLHL26Q53HC5 615 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 DCST1Q5T197 706 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 USP51Q70EK9 711 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 RANBP3LQ86VV4 465 aaPredicted RBP21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 PRR22Q8IZ63 422 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 OR9Q2Q8NGE9 314 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 SLC7A13Q8TCU3 470 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 CNOT9Q92600 299 aaKnown RBP21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 SLC35B4Q969S0 331 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 POLR2J2Q9GZM3 115 aaKnown RBP21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 ZNF700Q9H0M5 742 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 POLR2J3Q9H1A7 115 aaKnown RBP21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 CTPS2Q9NRF8 586 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 UBQLN4Q9NRR5 601 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 DNAJB12Q9NXW2 375 aaKnown RBP21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 FLRT3Q9NZU0 649 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 TMCC3Q9ULS5 477 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 NTNG1Q9Y2I2 539 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 HS3ST3B1Q9Y662 390 aa21.09■□□□□ 0.97
SMARCB1-201ENST00000263121 TRBV11-1A0A0K0K1C0 115 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 SERINC4A6NH21 518 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 CPSF4LA6NMK7 179 aaKnown RBP21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 FAAHO00519 579 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 FMO6PO60774 539 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 OXSR1O95747 527 aaPredicted RBP21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 GNAO1P09471 354 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 CBLP22681 906 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 MYF6P23409 242 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 KCNAB2Q13303 367 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 B3GNT4Q9C0J1 378 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 KRT84Q9NSB2 600 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 FAM118AQ9NWS6 357 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 PCDHGB5Q9Y5G0 923 aa21.08■□□□□ 0.96
SMARCB1-201ENST00000263121 MUC6Q6W4X9 2439 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 IGHV1-45A0A0A0MS14 117 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 A0A1W2PQ72 361 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 SH3PXD2BA1X283 911 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 OR5F1O95221 314 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 UTS2O95399 124 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 IGHEP01854 428 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 GKN3PP0CG01 181 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 ABCD3P28288 659 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 PLCXD2Q0VAA5 305 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 TARDBPQ13148 414 aaKnown RBP eCLIP21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 UGT2A3Q6UWM9 527 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 PLEKHM3Q6ZWE6 761 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 GALNT5Q7Z7M9 940 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 ADAMTS16Q8TE57 1224 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 GATA6Q92908 595 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 OMA1Q96E52 524 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 ADOQ96SZ5 270 aa21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 ANKRD19PQ9H560 264 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms