RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 C12orf73Q69YU5 71 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 PTRHD1Q6GMV3 140 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 TRILQ7L0X0 811 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 SIAH3Q8IW03 269 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 NATD1Q8N6N6 113 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 FADS6Q8N9I5 356 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 FBXO30Q8TB52 745 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 FAR1Q8WVX9 515 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 C5orf34Q96MH7 638 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 YIPF4Q9BSR8 244 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ABI3Q9P2A4 366 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 TRMT6Q9UJA5 497 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ASF1AQ9Y294 204 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 IGHV1-45A0A0A0MS14 117 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CCDC154A6NI56 674 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 HS6ST1O60243 411 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 LMX1BO60663 402 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CEACAM4O75871 244 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 H6PDO95479 791 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CPNE6O95741 557 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF806P0C7X5 589 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CCR4P51679 360 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 SMIM11AP58511 58 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF763Q0D2J5 394 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 COLEC12Q5KU26 742 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 WASHC2DQ5SRD0 308 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 RNF220Q5VTB9 566 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 B3GNTL1Q67FW5 361 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 RTL6Q6ICC9 239 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 TMEM91Q6ZNR0 172 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 OR7D2Q96RA2 312 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 PELI2Q9HAT8 420 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 DNAJC11Q9NVH1 559 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 MRPL22Q9NWU5 206 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CRLS1Q9UJA2 301 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 KLK13Q9UKR3 277 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ARHGAP33O14559 1287 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 EI24O14681 340 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CHST10O43529 356 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 GLSO94925 669 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 APOA1P02647 267 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 ITGB2P05107 769 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 RETP07949 1114 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 OR56A5P0C7T3 313 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 NCF2P19878 526 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 RRM2P31350 389 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 AKT1P31749 480 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 NUDT2P50583 147 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 NANOS3P60323 173 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 GRSF1Q12849 480 aaKnown RBP eCLIP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 RCN1Q15293 331 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 RABEPKQ7Z6M1 372 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SETD7Q8WTS6 366 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 TSPEARQ8WU66 669 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 WDR89Q96FK6 387 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 LRRC46Q96FV0 321 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 RMND5BQ96G75 393 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 PLEKHA8Q96JA3 519 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CCDC74BQ96LY2 380 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 NKX3-1Q99801 234 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 MRPL13Q9BYD1 178 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 ROGDIQ9GZN7 287 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 EPB41L1Q9H4G0 881 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 POT1Q9NUX5 634 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SCN3BQ9NY72 215 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CNOT11Q9UKZ1 510 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 COPS3Q9UNS2 423 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 C19orf53Q9UNZ5 99 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 PCDHGA3Q9Y5H0 932 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 ZAR1LA6NP61 321 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 AGRPO00253 132 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 TO15178 435 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC16A6O15403 523 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 DUX1O43812 170 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 DEAF1O75398 565 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 E2F6O75461 281 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 LIMS3P0CW19 117 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 LIMS4P0CW20 117 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CRHBPP24387 322 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CXCL12P48061 93 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SGO1Q5FBB7 561 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CDK20Q8IZL9 346 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 OFCC1Q8IZS5 231 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 TAGAPQ8N103 731 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 PSD4Q8NDX1 1056 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 TRPV3Q8NET8 790 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SNRNP27Q8WVK2 155 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 TMEM19Q96HH6 336 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SHDQ96IW2 340 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 REEP4Q9H6H4 257 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 PLSCR2Q9NRY7 297 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CHRNA9Q9UGM1 479 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 FBXL21Q9UKT6 434 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SCML1Q9UN30 329 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 TXNDC9O14530 226 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 UBDO15205 165 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 PPIBP23284 216 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 AFF3P51826 1226 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 KCNC4Q03721 635 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SGCGQ13326 291 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms