RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CLNS1AP54105 237 aaKnown RBP20.78■□□□□ 0.92
LSM4-201ENST00000252816 GANABQ14697 944 aaKnown RBP20.78■□□□□ 0.92
LSM4-201ENST00000252816 SF3B4Q15427 424 aaKnown RBP eCLIP20.78■□□□□ 0.92
LSM4-201ENST00000252816 HSPB2Q16082 182 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 MEX3BQ6ZN04 569 aaKnown RBP20.78■□□□□ 0.92
LSM4-201ENST00000252816 C6orf120Q7Z4R8 191 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 SPATA19Q7Z5L4 167 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 ZNF295-AS1Q8N0V1 137 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 OR5D16Q8NGK9 328 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 OR4A15Q8NGL6 344 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 OR5M1Q8NGP8 315 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 OR7D2Q96RA2 312 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 SH3GL2Q99962 352 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 TREX2Q9BQ50 279 aaPredicted RBP20.78■□□□□ 0.92
LSM4-201ENST00000252816 RUBCNLQ9H714 662 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 PTGES2Q9H7Z7 377 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 CALHM2Q9HA72 323 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 GPR45Q9Y5Y3 372 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 HCFC1P51610 2035 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 RNF103-CHMP3A0A140T963 221 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 MBD3L4A6NDZ8 208 aaPredicted RBP20.77■□□□□ 0.92
LSM4-201ENST00000252816 MBD3L3A6NE82 208 aaPredicted RBP20.77■□□□□ 0.92
LSM4-201ENST00000252816 MBD3L5A6NJ08 208 aaPredicted RBP20.77■□□□□ 0.92
LSM4-201ENST00000252816 C9JVG2 144 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 E9PBE3 544 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 H0Y3Z8 333 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 ZNF195O14628 629 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 NDUFB5O43674 189 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 KRT16P08779 473 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 ZNF708P17019 499 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 MSX1P28360 303 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 IL12AP29459 219 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 RCAN2Q14206 197 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 FAM174BQ3ZCQ3 159 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 SLC9B1Q4ZJI4 515 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 DCST2Q5T1A1 773 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 ANXA8L1Q5VT79 327 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 RAET1LQ5VY80 246 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 BHLHB9Q6PI77 547 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 POMZP3Q6PJE2 187 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 ARSKQ6UWY0 536 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 PLXDC2Q6UX71 529 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 ADGRE4PQ86SQ3 457 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 C9orf106Q8NAJ2 232 aa20.77■□□□□ 0.92
LSM4-201ENST00000252816 MBD3L2Q8NHZ7 208 aaPredicted RBP20.77■□□□□ 0.92
LSM4-201ENST00000252816 MAELQ96JY0 434 aaKnown RBP20.77■□□□□ 0.92
LSM4-201ENST00000252816 NPIPA5A0A0B4J1W7 369 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 OR2M5A3KFT3 312 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 NPIPA7E9PJI5 369 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 CPSF4O95639 269 aaKnown RBP20.76■□□□□ 0.91
LSM4-201ENST00000252816 NPIPA8P0DM63 369 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 S100A3P33764 101 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 ZNF136P52737 540 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 DGKQP52824 942 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 CD226Q15762 336 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 DPY19L1Q2PZI1 675 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 SLC25A35Q3KQZ1 300 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 HDXQ7Z353 690 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 RELL2Q8NC24 303 aaPredicted RBP20.76■□□□□ 0.91
LSM4-201ENST00000252816 PIWIL2Q8TC59 973 aaKnown RBP20.76■□□□□ 0.91
LSM4-201ENST00000252816 KLHDC3Q9BQ90 382 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 PCDHGB4Q9UN71 923 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 ZNF337Q9Y3M9 751 aa20.76■□□□□ 0.91
LSM4-201ENST00000252816 CLCA1A8K7I4 914 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 SHISA8B8ZZ34 492 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 IL2RAP01589 272 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 ATP6V1C1P21283 382 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 MATN1P21941 496 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 BMP5P22003 454 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 CASP9P55211 416 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 BCL2A1Q16548 175 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 TMEM44Q2T9K0 475 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 NXNQ6DKJ4 435 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 VPS37AQ8NEZ2 397 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 SLC35G5Q96KT7 338 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 OR52B2Q96RD2 323 aa20.75■□□□□ 0.91
LSM4-201ENST00000252816 A0A1W2PQD3 144 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 NPIPB9F8W1W9 429 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 SCDO00767 359 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 SOX30O94993 753 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 HPGDP15428 266 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 POU3F2P20265 443 aaPredicted RBP20.74■□□□□ 0.91
LSM4-201ENST00000252816 RNF144AP50876 292 aaPredicted RBP20.74■□□□□ 0.91
LSM4-201ENST00000252816 CLDN15P56746 228 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 GLYR1Q49A26 553 aaPredicted RBP20.74■□□□□ 0.91
LSM4-201ENST00000252816 GDF7Q7Z4P5 450 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 ACTRT2Q8TDY3 377 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 SH3YL1Q96HL8 342 aaPredicted RBP20.74■□□□□ 0.91
LSM4-201ENST00000252816 MARK4Q96L34 752 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 CCDC115Q96NT0 180 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 UCN2Q96RP3 112 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 SDF2Q99470 211 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 CLCF1Q9UBD9 225 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 VDAC3Q9Y277 283 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 DOCK7Q96N67 2140 aa20.74■□□□□ 0.91
LSM4-201ENST00000252816 TACC2O95359 2948 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 H0YC42 278 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 DVL2O14641 736 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 C1QCP02747 245 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 PEPDP12955 493 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms