RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 GSX1Q9H4S2 264 aaPredicted RBP18.94■□□□□ 0.62
NEDD8-201ENST00000250495 ANKZF1Q9H8Y5 726 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 PAQR5Q9NXK6 330 aaPredicted RBP18.94■□□□□ 0.62
NEDD8-201ENST00000250495 C6orf203Q9P0P8 240 aaPredicted RBP18.94■□□□□ 0.62
NEDD8-201ENST00000250495 NAV3Q8IVL0 2385 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 GMFGO60234 142 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 FGF4P08620 206 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 LINC00032P0C843 101 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 ZNF17P17021 662 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 TBXA2RP21731 343 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 CRYGSP22914 178 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 LCN1P31025 176 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 FRKP42685 505 aaPredicted RBP18.93■□□□□ 0.62
NEDD8-201ENST00000250495 NKX6-1P78426 367 aaPredicted RBP18.93■□□□□ 0.62
NEDD8-201ENST00000250495 PDE7AQ13946 482 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 ZNF385BQ569K4 471 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 WDR93Q6P2C0 686 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 SZRD1Q7Z422 152 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 R3HCC1LQ7Z5L2 792 aaKnown RBP18.93■□□□□ 0.62
NEDD8-201ENST00000250495 WDR75Q8IWA0 830 aaKnown RBP18.93■□□□□ 0.62
NEDD8-201ENST00000250495 OR2T11Q8NH01 316 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 OR4C3Q8NH37 302 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 FAM110BQ8TC76 370 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 EPS8L3Q8TE67 593 aaKnown RBP18.93■□□□□ 0.62
NEDD8-201ENST00000250495 PIGTQ969N2 578 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 MS4A4EQ96PG1 132 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 PARD6BQ9BYG5 372 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 BAIAP2L1Q9UHR4 511 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 VDAC3Q9Y277 283 aa18.93■□□□□ 0.62
NEDD8-201ENST00000250495 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 EIF1AYO14602 144 aaKnown RBP18.92■□□□□ 0.62
NEDD8-201ENST00000250495 ARHGEF9O43307 516 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 ERLIN1O75477 346 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 OXSR1O95747 527 aaPredicted RBP18.92■□□□□ 0.62
NEDD8-201ENST00000250495 HPGDP15428 266 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 EIF1AXP47813 144 aaKnown RBP18.92■□□□□ 0.62
NEDD8-201ENST00000250495 SERPINB4P48594 390 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 RPL38P63173 70 aaKnown RBP18.92■□□□□ 0.62
NEDD8-201ENST00000250495 PCLAFQ15004 111 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.92■□□□□ 0.62
NEDD8-201ENST00000250495 BIVMQ86UB2 503 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 GGNQ86UU5 652 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 SLC16A11Q8NCK7 471 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 ACTRT2Q8TDY3 377 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.92■□□□□ 0.623e-6■■■□□ 18.4
NEDD8-201ENST00000250495 GIMAP5Q96F15 307 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 PIP5K1AQ99755 562 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 TUBB1Q9H4B7 451 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 UBQLN4Q9NRR5 601 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 EMC9Q9Y3B6 208 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 DNAJC15Q9Y5T4 150 aa18.92■□□□□ 0.62
NEDD8-201ENST00000250495 FLNAP21333 2647 aaKnown RBP18.92■□□□□ 0.62
NEDD8-201ENST00000250495 DEFB108AA8MXU0 73 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 SHISA8B8ZZ34 492 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 LSM1O15116 133 aaKnown RBP18.91■□□□□ 0.62
NEDD8-201ENST00000250495 AQP8O94778 261 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 KCNK2O95069 426 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 HSPA4LO95757 839 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 ALOX5P09917 674 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 ACP2P11117 423 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 HOXB4P17483 251 aaPredicted RBP18.91■□□□□ 0.62
NEDD8-201ENST00000250495 PRIM2P49643 509 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 GUSBP1Q15486 140 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 GALNTL6Q49A17 601 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 CPTPQ5TA50 214 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 KANK2Q63ZY3 851 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 PPP4R4Q6NUP7 873 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 MFSD12Q6NUT3 480 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 FIGNL1Q6PIW4 674 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 LRIG3Q6UXM1 1119 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 GALNT10Q86SR1 603 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 CXorf67Q86X51 503 aaPredicted RBP18.91■□□□□ 0.62
NEDD8-201ENST00000250495 MISPQ8IVT2 679 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 DDIASQ8IXT1 998 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 GTPBP8Q8N3Z3 284 aaPredicted RBP18.91■□□□□ 0.62
NEDD8-201ENST00000250495 CLHC1Q8NHS4 586 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 ZBTB8AQ96BR9 441 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 PIK3IP1Q96FE7 263 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 C18orf12Q96KH6 178 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 EML4Q9HC35 981 aaKnown RBP18.91■□□□□ 0.62
NEDD8-201ENST00000250495 PLSCR4Q9NRQ2 329 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 TRAF6Q9Y4K3 522 aa18.91■□□□□ 0.62
NEDD8-201ENST00000250495 TMEM114B3SHH9 223 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 SCDO00767 359 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 NPHS1O60500 1241 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 PLGP00747 810 aaPredicted RBP18.9■□□□□ 0.62
NEDD8-201ENST00000250495 FPR1P21462 350 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 RPL3P39023 403 aaKnown RBP18.9■□□□□ 0.62
NEDD8-201ENST00000250495 ZNF41P51814 821 aaPredicted RBP18.9■□□□□ 0.62
NEDD8-201ENST00000250495 RAC1P63000 192 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 MLC1Q15049 377 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 DUSP5Q16690 384 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 P3H2Q8IVL5 708 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 LRRC75A-AS1Q8N1F1 130 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 COX18Q8N8Q8 333 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 CAVIN3Q969G5 261 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 C16orf58Q96GQ5 468 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 GMPPAQ96IJ6 420 aaPredicted RBP18.9■□□□□ 0.62
NEDD8-201ENST00000250495 KLHL4Q9C0H6 718 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 FANCFQ9NPI8 374 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms