RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 OR8J1Q8NGP2 316 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 NIPSNAP1Q9BPW8 284 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 PHRF1Q9P1Y6 1649 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 MAGEB4O15481 346 aaPredicted RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 CACNG3O60359 315 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 JUPP14923 745 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 HRH2P25021 359 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 HOXD11P31277 338 aaPredicted RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 RGS6P49758 472 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 VEGFCP49767 419 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 ZNF136P52737 540 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 C9orf135Q5VTT2 229 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 KIAA1211LQ6NV74 962 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 COMMD6Q7Z4G1 85 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 OR13C2Q8NGS9 318 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 LKAAEAR1Q8TD35 194 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 C4orf36Q96KX1 117 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 VRK1Q99986 396 aaPredicted RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 A0A0G2JMP0 313 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 LEFTY2O00292 366 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 BRINP1O60477 761 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 CPNE6O95741 557 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 DCKP27707 260 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 CTXN1P60606 82 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 ZMAT1Q5H9K5 638 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 FAM74A1Q5RGS3 127 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 EMC10Q5UCC4 262 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 OR4M2Q8NGB6 313 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 CD200R1Q8TD46 325 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 HAS2Q92819 552 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 SUSD3Q96L08 255 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 LRFN1Q9P244 771 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RPS10-NUDT3A0A1W2PQS6 291 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 GGT2P36268 569 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RPS10P46783 165 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 RNF4P78317 190 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RFPL4BQ6ZWI9 263 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 L3HYPDHQ96EM0 354 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RGPD5Q99666 1765 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 M0QYG6 137 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 LDB3O75112 727 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 ASGR2P07307 311 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 PLEKHS1Q5SXH7 462 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 Q6ZNX1 250 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 TMEM173Q86WV6 379 aaPredicted RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 OR56A3Q8NH54 315 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 BORCS8Q96FH0 119 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 AP1S3Q96PC3 154 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 NOX3Q9HBY0 568 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 CHD3Q12873 2000 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 NUP188Q5SRE5 1749 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RAB3DO95716 219 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 IFNA2P01563 188 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 PTPN2P17706 415 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 P2RX3P56373 397 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RGNQ15493 299 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 TMEM150AQ86TG1 271 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 OR7G2Q8NG99 324 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 URGCP-MRPS24S4R325 110 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 SLC16A8O95907 504 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 LIPAP38571 399 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 ESPNLQ6ZVH7 1005 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 OR2A12Q8NGT7 310 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 OR5AK2Q8NH90 309 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 DUSP19Q8WTR2 217 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 CHPT1Q8WUD6 406 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 HYLS1Q96M11 299 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 PSKH2Q96QS6 385 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 TESQ9UGI8 421 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 A0A087WV62 115 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 DDCP20711 480 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 CAV2P51636 162 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 UBXN2BQ14CS0 331 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 GPR33Q49SQ1 333 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 PLAG1Q6DJT9 500 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 MCATQ8IVS2 390 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 OR52N2Q8NGI0 321 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 FAM174AQ8TBP5 190 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 ORAI1Q96D31 301 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 VRTNQ9H8Y1 702 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RDH14Q9HBH5 336 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 MRM3Q9HC36 420 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 WASH6PQ9NQA3 447 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 TXNL4BQ9NX01 149 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 SCGB1D1O95968 90 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RPS2P15880 293 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 HIST2H3PS2Q5TEC6 136 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 OR5M10Q6IEU7 315 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 NRROSQ86YC3 692 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 SEMA4CQ9C0C4 833 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 ZNF768Q9H5H4 540 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 RHCEP18577 417 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 XCR1P46094 333 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 PLGLB1Q02325 96 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 LY6G5CQ5SRR4 150 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 RBM45Q8IUH3 476 aaKnown RBP7.1□□□□□ -1.27
RIF1-201ENST00000243326 TMEM40Q8WWA1 233 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 SEC14L5O43304 696 aa7.1□□□□□ -1.27
RIF1-201ENST00000243326 SIAH3Q8IW03 269 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms