RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SLC38A2Q96QD8 506 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 ZNF649Q9BS31 505 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 PRR14Q9BWN1 585 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 EMC7Q9NPA0 242 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 MCUBQ9NWR8 336 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 EIF3KQ9UBQ5 218 aaKnown RBP19.19■□□□□ 0.66
SNX3-201ENST00000230085 LIPT1Q9Y234 373 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 SYT5O00445 386 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 CASKO14936 926 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 BCAT2O15382 392 aaPredicted RBP19.19■□□□□ 0.66
SNX3-201ENST00000230085 HPGDSO60760 199 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 B4GALT2O60909 372 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 RFPL3O75679 317 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 IGFALSP35858 605 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 SLC1A3P43003 542 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 TRA2BP62995 288 aaKnown RBP19.19■□□□□ 0.66
SNX3-201ENST00000230085 ZNF155Q12901 538 aaPredicted RBP19.19■□□□□ 0.66
SNX3-201ENST00000230085 P2RY14Q15391 338 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 OR2G6Q5TZ20 316 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 IQCF1Q8N6M8 205 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 SPERTQ8NA61 448 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 GNPDA2Q8TDQ7 276 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 LOXL4Q96JB6 756 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 FNDC11Q9BVV2 318 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 ARRDC1-AS1Q9H2J1 176 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 ZNF275Q9NSD4 429 aaPredicted RBP19.19■□□□□ 0.66
SNX3-201ENST00000230085 NLKQ9UBE8 527 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 COMMD3Q9UBI1 195 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 KCNN3Q9UGI6 736 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 YARS2Q9Y2Z4 477 aaKnown RBP19.19■□□□□ 0.66
SNX3-201ENST00000230085 C17orf113A0A1B0GUU1 675 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 LEUTXA8MZ59 168 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 GBAP04062 536 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 RFX3P48380 749 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 MTNR1BP49286 362 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 MANFP55145 182 aaKnown RBP19.18■□□□□ 0.66
SNX3-201ENST00000230085 TSPAN31Q12999 210 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 MRPL28Q13084 256 aaKnown RBP19.18■□□□□ 0.66
SNX3-201ENST00000230085 GNA13Q14344 377 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 SNAPC1Q16533 368 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 UTS2BQ765I0 119 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 HDDC2Q7Z4H3 204 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 KIF18BQ86Y91 864 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 RBM45Q8IUH3 476 aaKnown RBP19.18■□□□□ 0.66
SNX3-201ENST00000230085 ADGRF3Q8IZF5 1079 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 ANKK1Q8NFD2 765 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 TMEM203Q969S6 136 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 SENP5Q96HI0 755 aaPredicted RBP19.18■□□□□ 0.66
SNX3-201ENST00000230085 SPNS1Q9H2V7 528 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 DPEP2Q9H4A9 486 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 RANBP3Q9H6Z4 567 aaPredicted RBP19.18■□□□□ 0.66
SNX3-201ENST00000230085 PELI2Q9HAT8 420 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 CYSLTR2Q9NS75 346 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 NUP50Q9UKX7 468 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 HS3ST3A1Q9Y663 406 aa19.18■□□□□ 0.66
SNX3-201ENST00000230085 OR5K3A6NET4 321 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 ANKDD1BA6NHY2 528 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 C12orf71A8MTZ7 269 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 TPD52L2O43399 206 aaKnown RBP19.17■□□□□ 0.66
SNX3-201ENST00000230085 WNT1P04628 370 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 SSTR4P31391 388 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 BSGP35613 385 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 CSNK1EP49674 416 aaKnown RBP19.17■□□□□ 0.66
SNX3-201ENST00000230085 DPTQ07507 201 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 AADACL4Q5VUY2 407 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 TNFAIP8L2Q6P589 184 aaPredicted RBP19.17■□□□□ 0.66
SNX3-201ENST00000230085 TMEM64Q6YI46 380 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 TEX47Q8TBZ9 253 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 HGDQ93099 445 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 UCN3Q969E3 161 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 SCMH1Q96GD3 660 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 TM9SF2Q99805 663 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 MS4A8Q9BY19 250 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 RNF32Q9H0A6 362 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 SERHL2Q9H4I8 314 aa19.17■□□□□ 0.66
SNX3-201ENST00000230085 PATE3B3GLJ2 98 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 PLPP1O14494 284 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 TBX6O95947 436 aaPredicted RBP19.16■□□□□ 0.66
SNX3-201ENST00000230085 ERGP11308 486 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 GNSP15586 552 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 CD38P28907 300 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 PDHA2P29803 388 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 PPP2R1BP30154 601 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 IFNA8P32881 189 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 MAPK12P53778 367 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 RAG2P55895 527 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 NHLH1Q02575 133 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 IL18Q14116 193 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 KHDRBS2Q5VWX1 349 aaKnown RBP19.16■□□□□ 0.66
SNX3-201ENST00000230085 PEAR1Q5VY43 1037 aaPredicted RBP19.16■□□□□ 0.66
SNX3-201ENST00000230085 RAET1GQ6H3X3 334 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 LRRC28Q86X40 367 aaPredicted RBP19.16■□□□□ 0.66
SNX3-201ENST00000230085 LILRA3Q8N6C8 439 aaPredicted RBP19.16■□□□□ 0.66
SNX3-201ENST00000230085 NEIL3Q8TAT5 605 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 GATAD2BQ8WXI9 593 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 OTULINQ96BN8 352 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 ZCCHC2Q9C0B9 1178 aaKnown RBP19.16■□□□□ 0.66
SNX3-201ENST00000230085 SAP130Q9H0E3 1048 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 SMOC1Q9H4F8 434 aa19.16■□□□□ 0.66
SNX3-201ENST00000230085 HSPB11Q9Y547 144 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms