RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.81□□□□□ -1
HLA-DOA-201ENST00000229829 SZT2Q5T011 3432 aa8.81□□□□□ -1
HLA-DOA-201ENST00000229829 CACNA1CQ13936 2221 aa8.81□□□□□ -1
HLA-DOA-201ENST00000229829 TEX13CA0A0J9YWL9 993 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 IQCMA0A1B0GVH7 501 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 CHP2O43745 196 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 MPC2O95563 127 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 NR2F1P10589 423 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 POU3F2P20265 443 aaPredicted RBP8.8□□□□□ -1
HLA-DOA-201ENST00000229829 RAB3BP20337 219 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 PTNP21246 168 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 NTRK2Q16620 822 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 CLEC12AQ5QGZ9 265 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 ZNF697Q5TEC3 545 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 UBE3DQ7Z6J8 389 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 LHFPL3Q86UP9 236 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 KRT78Q8N1N4 520 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 OR8D4Q8NGM9 314 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 TFGQ92734 400 aaPredicted RBP8.8□□□□□ -1
HLA-DOA-201ENST00000229829 KLK6Q92876 244 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 FGF11Q92914 225 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 NXPE3Q969Y0 559 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 FNDC11Q9BVV2 318 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 SLC6A15Q9H2J7 730 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 GHITMQ9H3K2 345 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 EPHX3Q9H6B9 360 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 METTL17Q9H7H0 456 aaPredicted RBP8.8□□□□□ -1
HLA-DOA-201ENST00000229829 GSTK1Q9Y2Q3 226 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 KCNE3Q9Y6H6 103 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 L7N2F9 121 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 MID1O15344 667 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 CH25HO95992 272 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 RRASP10301 218 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 ACRP10323 421 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 ITGB8P26012 769 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 MAPK9P45984 424 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 C17orf64Q86WR6 236 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 CACUL1Q86Y37 369 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 MARCH9Q86YJ5 346 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 SLC30A8Q8IWU4 369 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 FAM26EQ8N5C1 309 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 MORN4Q8NDC4 146 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 OR2L2Q8NH16 312 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 RAD51AP1Q96B01 352 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 NXPE2Q96DL1 559 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 ERMAPQ96PL5 475 aaPredicted RBP8.8□□□□□ -1
HLA-DOA-201ENST00000229829 TEFMQ96QE5 360 aaKnown RBP8.8□□□□□ -1
HLA-DOA-201ENST00000229829 DDOQ99489 341 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 POLDIP3Q9BY77 421 aaKnown RBP8.8□□□□□ -1
HLA-DOA-201ENST00000229829 GLIPR2Q9H4G4 154 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 ACTR10Q9NZ32 417 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 AHSPQ9NZD4 102 aa8.8□□□□□ -1
HLA-DOA-201ENST00000229829 SF3B6Q9Y3B4 125 aaKnown RBP8.8□□□□□ -1
HLA-DOA-201ENST00000229829 TRBV23-1A0A0A0MS06 115 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CD8B2A6NJW9 211 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 PRRT4C9JH25 899 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 SMAD9O15198 467 aaKnown RBP8.79□□□□□ -1
HLA-DOA-201ENST00000229829 OR1F1O43749 312 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 SSX5O60225 188 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 SNRNP200O75643 2136 aaKnown RBP8.79□□□□□ -1
HLA-DOA-201ENST00000229829 RAB36O95755 333 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CD8BP10966 210 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CPEP16870 476 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 LCN1P31025 176 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 BUD31P41223 144 aaPredicted RBP8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CLCNKAP51800 687 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 EFNB1P98172 346 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 FABP5Q01469 135 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 ZNF77Q15935 545 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 TIGD3Q6B0B8 471 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 ELP2Q6IA86 826 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 LCTLQ6UWM7 567 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 NRSN1Q8IZ57 195 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 MOSPD2Q8NHP6 518 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 SETD7Q8WTS6 366 aaKnown RBP8.79□□□□□ -1
HLA-DOA-201ENST00000229829 AP3S1Q92572 193 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 UBE2E3Q969T4 207 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 MSLNLQ96KJ4 702 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 ZNF607Q96SK3 696 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 LGR4Q9BXB1 951 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 AICDAQ9GZX7 198 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 OR51J1Q9H342 316 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 ZCCHC3Q9NUD5 404 aaKnown RBP8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CNIH4Q9P003 139 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 IL20RAQ9UHF4 553 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 SHISA3A0PJX4 238 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 TTLL8A6PVC2 850 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 DVL2O14641 736 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 TPOP07202 933 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 RHOP08100 348 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CHRM4P08173 479 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CD3GP09693 182 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 C8orf89P0DMQ9 161 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 HOXB3P14651 431 aaPredicted RBP8.79□□□□□ -1
HLA-DOA-201ENST00000229829 GIFP27352 417 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CCR6P51684 374 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 POLR2GP62487 172 aaKnown RBP eCLIP8.79□□□□□ -1
HLA-DOA-201ENST00000229829 CDK5Q00535 292 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 DUSP2Q05923 314 aa8.79□□□□□ -1
HLA-DOA-201ENST00000229829 FUT5Q11128 374 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms