RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 RAB40BQ12829 278 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 ILKQ13418 452 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 ABHD13Q7L211 337 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 METTL21AQ8WXB1 218 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 DTD2Q96FN9 168 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 ZNF559Q9BR84 538 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SLC28A3Q9HAS3 691 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 BABAM2Q9NXR7 383 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 PCDHGB2Q9Y5G2 931 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 CACNG2Q9Y698 323 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 LOXHD1Q8IVV2 1947 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SOX1O00570 391 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SLC2A10O95528 541 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 RENP00797 406 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 TFP02787 698 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 DRD2P14416 443 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 PTPN6P29350 595 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SOX18P35713 384 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SEC23BQ15437 767 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 NKPD1Q17RQ9 610 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 TCTN3Q6NUS6 607 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 GALNT6Q8NCL4 622 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 OR56A3Q8NH54 315 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 CREB3L4Q8TEY5 395 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 CHTF18Q8WVB6 975 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 LINC01599Q8WXQ3 324 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 MKRN2Q9H000 416 aaKnown RBP12.91□□□□□ -0.34
NFKB1-201ENST00000226574 METTL17Q9H7H0 456 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-201ENST00000226574 RBFOX1Q9NWB1 397 aaKnown RBP12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SLC6A14Q9UN76 642 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 RCE1Q9Y256 329 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 CA5BQ9Y2D0 317 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 A0A0G2JPF8 293 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 HNRNPCL3B7ZW38 293 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 POLR1CO15160 346 aaPredicted RBP12.9□□□□□ -0.34
NFKB1-201ENST00000226574 VEGFDO43915 354 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 UBXN7O94888 489 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 FGF19O95750 216 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 HNRNPCL4P0DMR1 293 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 CHRNB1P11230 501 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 IL12BP29460 328 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 PRLHRP49683 370 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 FAPQ12884 760 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 CHAF1BQ13112 559 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 CDK10Q15131 360 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 FAM27D1Q5T7N8 215 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 GARNL3Q5VVW2 1013 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 HTR3DQ70Z44 454 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 VASH1Q7L8A9 365 aaPredicted RBP12.9□□□□□ -0.34
NFKB1-201ENST00000226574 OR13C2Q8NGS9 318 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 PRRC1Q96M27 445 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 ATG5Q9H1Y0 275 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 GLIPR2Q9H4G4 154 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 SLA2Q9H6Q3 261 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 TMEM184CQ9NVA4 438 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 TRAV18A0A075B6X5 111 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 PLPP1O14494 284 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 KAT7O95251 611 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 F11P03951 625 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 ACP2P11117 423 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 UGT2B10P36537 528 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 SF3A2Q15428 464 aaKnown RBP12.9□□□□□ -0.34
NFKB1-201ENST00000226574 GGTA1PQ4G0N0 100 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 BEX5Q5H9J7 111 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 KLHL24Q6TFL4 600 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 ZER1Q7Z7L7 766 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 NKAIN4Q8IVV8 208 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 OR2L5Q8NG80 312 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 TMEM163Q8TC26 289 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 CREB3L1Q96BA8 519 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 DGAT2Q96PD7 388 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 SNX18Q96RF0 628 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 NRTNQ99748 197 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.34
NFKB1-201ENST00000226574 PLEKHA1Q9HB21 404 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 KANTRA0A1W2PQU2 76 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 GXYLT2A0PJZ3 443 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 HCRTR2O43614 444 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 DOK2O60496 412 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 AGR2O95994 175 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 ZNF806P0C7X5 589 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 HOXB2P14652 356 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 SOX9P48436 509 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 B4GALNT1Q00973 533 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 INSL4Q14641 139 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 SWI5Q1ZZU3 235 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 SYT14P1Q58G82 188 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 FAM111BQ6SJ93 734 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 GPALPP1Q8IXQ4 340 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 SLC16A11Q8NCK7 471 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 TMEM239Q8WW34 195 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 MMABQ96EY8 250 aaPredicted RBP12.9□□□□□ -0.34
NFKB1-201ENST00000226574 OR7D2Q96RA2 312 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 CMKLR1Q99788 373 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 SPNS1Q9H2V7 528 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 GRHPRQ9UBQ7 328 aa12.9□□□□□ -0.34
NFKB1-201ENST00000226574 TRAPPC13A5PLN9 417 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 HEPACAM2A8MVW5 462 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 F5H0A9 414 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 HRO43593 1189 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms