RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PHF11Q9UIL8 331 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 SPTY2D1-AS1A0A0U1RR47 76 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 M0R296 226 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 TMCC2O75069 709 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 CERS1P27544 350 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 DUSP2Q05923 314 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 SLC35F1Q5T1Q4 408 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 C18orf63Q68DL7 685 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 VWA5B2Q8N398 1253 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 ADAMTS15Q8TE58 950 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 GATAD2BQ8WXI9 593 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 MS4A4EQ96PG1 132 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 SOSTQ9BQB4 213 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 CARD8Q9Y2G2 431 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 KCNE3Q9Y6H6 103 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 CDH10Q9Y6N8 788 aa23.21■■□□□ 1.31
RUNDC3A-201ENST00000225441 CCDC182A6NF36 153 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 PRKRAO75569 313 aaKnown RBP23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 RASGRP1O95267 797 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 TDGF1P13385 188 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 MC3RP41968 323 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 FNTBP49356 437 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 RGS8P57771 180 aaPredicted RBP23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 RGS1Q08116 209 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 EIF2B5Q13144 721 aaKnown RBP23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 FZD2Q14332 565 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 PGGHGQ32M88 737 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 OR2G6Q5TZ20 316 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 MZT2AQ6P582 158 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 PLEKHM3Q6ZWE6 761 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 PHOX2BQ99453 314 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 EVA1AQ9H8M9 152 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 TMEM165Q9HC07 324 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 APOBEC3BQ9UH17 382 aaKnown RBP23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 ADAM30Q9UKF2 790 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 EML5Q05BV3 1969 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 TECTAO75443 2155 aa23.2■■□□□ 1.3
RUNDC3A-201ENST00000225441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 A0A1W2PR77 199 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 WASHC1A8K0Z3 465 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 IDH3BO43837 385 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 SSX4O60224 188 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 TNFP01375 233 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 THBS1P07996 1170 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 CSF3P09919 207 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 MAOBP27338 520 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 MXD1Q05195 221 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 ATAD3CQ5T2N8 411 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 VRK2Q86Y07 508 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 GID4Q8IVV7 300 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 PEX5LQ8IYB4 626 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 TMEFF1Q8IYR6 380 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 DEPDC7Q96QD5 511 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 TMEM168Q9H0V1 697 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 TIGARQ9NQ88 270 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 PCDHGB7Q9Y5F8 929 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 MEIOCA2RUB1 952 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 CPSF4LA6NMK7 179 aaKnown RBP23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 LAMTOR5O43504 91 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 CD38P28907 300 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 PEBP1P30086 187 aaKnown RBP23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 RACK1P63244 317 aaKnown RBP23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZMAT1Q5H9K5 638 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZNF620Q6ZNG0 422 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 PAQR7Q86WK9 346 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 CACTIN-AS1Q8N1I8 211 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 FBXL6Q8N531 539 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 OR9A2Q8NGT5 310 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 PMM1Q92871 262 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 SLC22A18Q96BI1 424 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 SLC41A3Q96GZ6 507 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZC3HAV1LQ96H79 300 aaKnown RBP23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 FAM46AQ96IP4 442 aaKnown RBP23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 MCHR1Q99705 422 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 CLCA2Q9UQC9 943 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 N6AMT1Q9Y5N5 214 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 LRP4O75096 1905 aa23.19■■□□□ 1.3
RUNDC3A-201ENST00000225441 WNT1P04628 370 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 IFI6P09912 130 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 CLEC2LP0C7M8 214 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 AK4P27144 223 aaPredicted RBP23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 LSM11P83369 360 aaKnown RBP eCLIP23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 FABP5Q01469 135 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 IFITM2Q01629 132 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 ARHGAP11BQ3KRB8 267 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 LCN1P1Q5VSP4 162 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 MFSD12Q6NUT3 480 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 OLIG3Q7RTU3 272 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 WDR5BQ86VZ2 330 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 RNF113BQ8IZP6 322 aaKnown RBP23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 LRRC25Q8N386 305 aaPredicted RBP23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 ARIH2OSQ8N7S6 290 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 OR2T33Q8NG76 320 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 CCL4L1Q8NHW4 92 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 TMEM203Q969S6 136 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 SLC35A4Q96G79 324 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 C10orf90Q96M02 699 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 NEDD4LQ96PU5 975 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 DUSP15Q9H1R2 295 aaPredicted RBP23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 FN3KQ9H479 309 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms