RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PLAURQ03405 335 aa27.51■■□□□ 1.99
PABPN1-201ENST00000216727 MAMSTRQ6ZN01 415 aa27.51■■□□□ 1.99
PABPN1-201ENST00000216727 CLDN22Q8N7P3 220 aa27.51■■□□□ 1.99
PABPN1-201ENST00000216727 MVB12AQ96EY5 273 aa27.51■■□□□ 1.99
PABPN1-201ENST00000216727 LRR1Q96L50 414 aa27.51■■□□□ 1.99
PABPN1-201ENST00000216727 CUTCQ9NTM9 273 aa27.51■■□□□ 1.99
PABPN1-201ENST00000216727 TTC36A6NLP5 189 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 OR2B3O76000 313 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 LYPD3O95274 346 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 CFHR1Q03591 330 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 KCNAB1Q14722 419 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 ARMCX4Q5H9R4 360 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 LINC00299Q6ZSB3 139 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 CROCCP3Q8IVE0 287 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 TMEM163Q8TC26 289 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 SLC38A2Q96QD8 506 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 TAS2R16Q9NYV7 291 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 CSTF2P33240 577 aaKnown RBP eCLIP27.5■■□□□ 1.99
PABPN1-201ENST00000216727 NCS1P62166 190 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 ZNF829Q3KNS6 432 aaPredicted RBP27.5■■□□□ 1.99
PABPN1-201ENST00000216727 ZC3H14Q6PJT7 736 aaKnown RBP27.5■■□□□ 1.99
PABPN1-201ENST00000216727 WDR36Q8NI36 951 aaKnown RBP27.5■■□□□ 1.99
PABPN1-201ENST00000216727 DYNC2LI1Q8TCX1 351 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 RPL3LQ92901 407 aaKnown RBP27.5■■□□□ 1.99
PABPN1-201ENST00000216727 DTX4Q9Y2E6 619 aa27.5■■□□□ 1.99
PABPN1-201ENST00000216727 OR2W5A6NFC9 320 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 C19orf67A6NJJ6 358 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 EFCAB9A8MZ26 197 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 IGKV1D-16P01601 117 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 MLLT10P55197 1068 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 RHAGQ02094 409 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 ZNF620Q6ZNG0 422 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 BCDIN3DQ7Z5W3 292 aaKnown RBP27.49■■□□□ 1.99
PABPN1-201ENST00000216727 OR4N2Q8NGD1 307 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 ZNF582Q96NG8 517 aaPredicted RBP27.49■■□□□ 1.99
PABPN1-201ENST00000216727 ZNF559Q9BR84 538 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 CNPPD1Q9BV87 410 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 Q9N2J8 555 aa27.49■■□□□ 1.99
PABPN1-201ENST00000216727 MN1Q10571 1320 aaPredicted RBP27.49■■□□□ 1.99
PABPN1-201ENST00000216727 AIREO43918 545 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 PIP5K1CO60331 668 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 GPR4P46093 362 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 ARL4DP49703 201 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 RGS6P49758 472 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 ZSWIM7Q19AV6 140 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 PDZK1Q5T2W1 519 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 ZNF613Q6PF04 617 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 NPSR1Q6W5P4 371 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 D2HGDHQ8N465 521 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 SLC35B4Q969S0 331 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 OR10A5Q9H207 317 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 ZNF223Q9UK11 482 aaPredicted RBP27.48■■□□□ 1.99
PABPN1-201ENST00000216727 ERVK-19Q9WJR5 959 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 TMEM150CB9EJG8 249 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 GNSP15586 552 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 HOXA6P31267 233 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 SEPHS1P49903 392 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 DGUOKQ16854 277 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 ZNF615Q8N8J6 731 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 RCBTB1Q8NDN9 531 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 C16orf52Q8NHV5 167 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 OR5M11Q96RB7 305 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 MGLLQ99685 303 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 G6PC3Q9BUM1 346 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 TEX12Q9BXU0 123 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 LANCL2Q9NS86 450 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 GMEB2Q9UKD1 530 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 MMACHCQ9Y4U1 282 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 CDH10Q9Y6N8 788 aa27.48■■□□□ 1.99
PABPN1-201ENST00000216727 CCDC163A0A0D9SF12 145 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 SNTNA6NMZ2 147 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 CT45A8P0DMV1 189 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 CT45A9P0DMV2 189 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 RFX3P48380 749 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 ZNF141Q15928 474 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 CT45A2Q5DJT8 189 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 TTLL10Q6ZVT0 673 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 SLCO6A1Q86UG4 719 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 TMEM239Q8WW34 195 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 OR1F2PQ96R84 312 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 ELF4Q99607 663 aaPredicted RBP27.47■■□□□ 1.99
PABPN1-201ENST00000216727 RACGAP1Q9H0H5 632 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 TBC1D23Q9NUY8 699 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 MRPS18AQ9NVS2 196 aaKnown RBP27.47■■□□□ 1.99
PABPN1-201ENST00000216727 ERGIC3Q9Y282 383 aa27.47■■□□□ 1.99
PABPN1-201ENST00000216727 NPIPB9F8W1W9 429 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 IFNA16P05015 189 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 RPLP0P05388 317 aaKnown RBP27.46■■□□□ 1.99
PABPN1-201ENST00000216727 GADD45AP24522 165 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 GCGRP47871 477 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 ARRB1P49407 418 aaPredicted RBP27.46■■□□□ 1.99
PABPN1-201ENST00000216727 MED22Q15528 200 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 AMZ1Q400G9 498 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 WDR88Q6ZMY6 472 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 CNOT9Q92600 299 aaKnown RBP27.46■■□□□ 1.99
PABPN1-201ENST00000216727 VMP1Q96GC9 406 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 SLC41A2Q96JW4 573 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 TMEM27Q9HBJ8 222 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 LSM2Q9Y333 95 aaKnown RBP27.46■■□□□ 1.99
PABPN1-201ENST00000216727 MAU2Q9Y6X3 613 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms