RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 DRD5P21918 477 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 TMEM150AQ86TG1 271 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 DRAXINQ8NBI3 349 aaPredicted RBP12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ABHD5Q8WTS1 349 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 COG8Q96MW5 612 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 CDH20Q9HBT6 801 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 IER3IP1Q9Y5U9 82 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 USP3Q9Y6I4 520 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 MYH10P35580 1976 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ACTL6BO94805 426 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 EGFP01133 1207 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 PRDX3P30048 256 aaKnown RBP12.78□□□□□ -0.36
SF3A1-201ENST00000215793 PSPHP78330 225 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 GTPBP8Q8N3Z3 284 aaPredicted RBP12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ATOH8Q96SQ7 321 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 REV1Q9UBZ9 1251 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ENPP5Q9UJA9 477 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 P2RY2P41231 377 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 EMP2P54851 167 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 PCGF3Q3KNV8 242 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ANKRD54Q6NXT1 300 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 SLC16A9Q7RTY1 509 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ZNF761Q86XN6 746 aaPredicted RBP12.78□□□□□ -0.36
SF3A1-201ENST00000215793 SNAPC3Q92966 411 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ADAM18Q9Y3Q7 739 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 GABRR3A8MPY1 467 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 PAHP00439 452 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 LCATP04180 440 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 CSF1P09603 554 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 CAMLGP49069 296 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 SNU13P55769 128 aaKnown RBP12.78□□□□□ -0.36
SF3A1-201ENST00000215793 RAB5BP61020 215 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 EIF2B1Q14232 305 aaKnown RBP12.78□□□□□ -0.36
SF3A1-201ENST00000215793 TP53I3Q53FA7 332 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 PPP1R35Q8TAP8 253 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ADAMTS16Q8TE57 1224 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 ZNF649Q9BS31 505 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
SF3A1-201ENST00000215793 TCRBV3S1A0A5B6 114 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 BOLA2-SMG1P6H3BVE0 249 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 SDC3O75056 442 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 RDH16O75452 317 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 CNMDO75829 334 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 RAB3DO95716 219 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 CCR7P32248 378 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 TAS2R31P59538 309 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 SLC7A9P82251 487 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 CDK3Q00526 305 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 MAP4K2Q12851 820 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 CNIH2Q6PI25 160 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 Q6ZSR6 202 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 KIF18BQ86Y91 864 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 CMTM1Q8IZ96 169 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 S100PBPQ96BU1 408 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 SFXN2Q96NB2 322 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 RAB9BQ9NP90 201 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 FAM227AF5H4B4 570 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 GPR157Q5UAW9 335 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 SLC6A19Q695T7 634 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 OR52E1Q8NGJ3 308 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 GLYATL2Q8WU03 294 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 BPIFA2Q96DR5 249 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 POT1Q9NUX5 634 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.36
SF3A1-201ENST00000215793 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 SLC22A5O76082 557 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 HTR3BO95264 441 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 SLC2A5P22732 501 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 TMEM244Q5VVB8 128 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 CFAP77Q6ZQR2 320 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 CBLL1Q75N03 491 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 PARS2Q7L3T8 475 aaKnown RBP12.77□□□□□ -0.37
SF3A1-201ENST00000215793 PNPLA1Q8N8W4 532 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 B3GNT7Q8NFL0 401 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 ASB11Q8WXH4 323 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 TIMM29Q9BSF4 260 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 INPP5EQ9NRR6 644 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 ABRACLQ9P1F3 81 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 A0A0A6YYC8 382 aaPredicted RBP12.77□□□□□ -0.37
SF3A1-201ENST00000215793 I3L1I5 382 aaPredicted RBP12.77□□□□□ -0.37
SF3A1-201ENST00000215793 MPIG6BO95866 241 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 HIST1H1TP22492 207 aaPredicted RBP12.77□□□□□ -0.37
SF3A1-201ENST00000215793 SGSHP51688 502 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 TAP2Q03519 686 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 PTPRRQ15256 657 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 SF3B4Q15427 424 aaKnown RBP eCLIP12.77□□□□□ -0.371e-6■■■□□ 16.5
SF3A1-201ENST00000215793 RABEPKQ7Z6M1 372 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 GPR149Q86SP6 731 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 SPARTQ8N0X7 666 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 OR14K1Q8NGZ2 314 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 ARRDC2Q8TBH0 407 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 NKX2-4Q9H2Z4 354 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 SYNPO2LQ9H987 977 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 ZNF160Q9HCG1 818 aa12.77□□□□□ -0.37
SF3A1-201ENST00000215793 UPK1BO75841 260 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 CA3P07451 260 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 ITGAMP11215 1152 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms