RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 ZFP82Q8N141 532 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 SPICQ8N5J4 248 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 L3MBTL4Q8NA19 623 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 RELL2Q8NC24 303 aaPredicted RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 PKP4Q99569 1192 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 C7orf50Q9BRJ6 194 aaKnown RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 SMG9Q9H0W8 520 aaKnown RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 POLR2J3Q9H1A7 115 aaKnown RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 MTG2Q9H4K7 406 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 WDR26Q9H7D7 661 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 TEX10Q9NXF1 929 aaPredicted RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 MIOXQ9UGB7 285 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 KCND3Q9UK17 655 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 EXOSC1Q9Y3B2 195 aaKnown RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 INSL5Q9Y5Q6 135 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 PRRC2BQ5JSZ5 2229 aaKnown RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 A0A1B0GW55 424 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 OR2M5A3KFT3 312 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 SCAMP1O15126 338 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 OR10H3O60404 316 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 PRMT3O60678 531 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 PRAF2O60831 178 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 LATS1O95835 1130 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 S100A8P05109 93 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 DUX4L2P0CJ85 424 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 DUX4L3P0CJ86 424 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 DUX4L4P0CJ87 422 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 DUX4L5P0CJ88 424 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 DUX4L6P0CJ89 424 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 DUX4L7P0CJ90 424 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 ACP2P11117 423 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 S100PP25815 95 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 AOAHP28039 575 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 THBS2P35442 1172 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 E2F1Q01094 437 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 RAB40BQ12829 278 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 TPGS2Q68CL5 300 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 TPRG1Q6ZUI0 275 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 PUSL1Q8N0Z8 303 aaKnown RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 CBARPQ8N350 705 aaPredicted RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 ELP4Q96EB1 424 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 ZNF285Q96NJ3 590 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 HMX1Q9NP08 348 aaPredicted RBP13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 GPATCH2Q9NW75 528 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 TAS2R3Q9NYW6 316 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 MED11Q9P086 117 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 DUX4Q9UBX2 424 aa13.9□□□□□ -0.18
TMEM38A-201ENST00000187762 GSAPA4D1B5 854 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 LRRC72A6NJI9 287 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SULT1C2O00338 296 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 IGHV2-70P01814 119 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 IFNW1P05000 195 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 GABRR2P28476 465 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 EPHB3P54753 998 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SGCAQ16586 387 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SYTL3Q4VX76 610 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 CCDC157Q569K6 752 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SLC25A30Q5SVS4 291 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 GCNT6Q5T4J0 391 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 LHFPL3Q86UP9 236 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 KRT78Q8N1N4 520 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 ANKRD19PQ9H560 264 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 ZDHHC6Q9H6R6 413 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SDHAF3Q9NRP4 125 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 ZNF275Q9NSD4 429 aaPredicted RBP13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 MKL2Q9ULH7 1088 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 DISC1C4P0D8 188 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 PRAMEF2O60811 474 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 NFATC1O95644 943 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 CXCL14O95715 111 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 CBSLP0DN79 551 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 CBSP35520 551 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 VEGFCP49767 419 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SNTB1Q13884 538 aaKnown RBP13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SLC22A10Q63ZE4 541 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SLC30A6Q6NXT4 461 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 ZNF852Q6ZMS4 543 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 HS6ST3Q8IZP7 471 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 CMTM8Q8IZV2 173 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 FAM71CQ8NEG0 241 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 OR11G2Q8NGC1 345 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 GNPDA2Q8TDQ7 276 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 MYLIPQ8WY64 445 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 ZNF707Q96C28 371 aaPredicted RBP13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 TCEAL4Q96EI5 215 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 TSNAXQ99598 290 aaKnown RBP13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 PAPOLGQ9BWT3 736 aaKnown RBP13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 SLC25A32Q9H2D1 315 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 MRPS18AQ9NVS2 196 aaKnown RBP13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 RASD1Q9Y272 281 aa13.89□□□□□ -0.19
TMEM38A-201ENST00000187762 IGF2P01344 180 aa13.88□□□□□ -0.19
TMEM38A-201ENST00000187762 HIST1H2ABP04908 130 aa13.88□□□□□ -0.19
TMEM38A-201ENST00000187762 CRYBA1P05813 215 aa13.88□□□□□ -0.19
TMEM38A-201ENST00000187762 TYRP14679 529 aa13.88□□□□□ -0.19
TMEM38A-201ENST00000187762 SYN1P17600 705 aa13.88□□□□□ -0.19
TMEM38A-201ENST00000187762 MAPK8P45983 427 aa13.88□□□□□ -0.19
TMEM38A-201ENST00000187762 SLC6A12P48065 614 aa13.88□□□□□ -0.19
TMEM38A-201ENST00000187762 LIM2P55344 173 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms