RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 AMTP48728 403 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 EDDM3BP56851 147 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ADARB1P78563 741 aaKnown RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 GK3PQ14409 553 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 DEFB109BQ30KR1 87 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 UGT2A3Q6UWM9 527 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ZNF662Q6ZS27 426 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ANKRD46Q86W74 232 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 KDF1Q8NAX2 398 aaPredicted RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 SLAMF9Q96A28 289 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 MRAP2Q96G30 205 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ZNF641Q96N77 438 aaPredicted RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 SORCS2Q96PQ0 1159 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 MINDY3Q9H8M7 445 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 PREBQ9HCU5 417 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 PAQR5Q9NXK6 330 aaPredicted RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 DNMT3BQ9UBC3 853 aaKnown RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 SPO11Q9Y5K1 396 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 CD8B2A6NJW9 211 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 F11P03951 625 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 T-ENOLP0DO92 83 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 HLA-FP30511 346 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 GJA4P35212 333 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 HTR5AP47898 357 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 EXT1Q16394 746 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 LIPNQ5VXI9 398 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 KIAA1211LQ6NV74 962 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 C22orf39Q6P5X5 142 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 INTS5Q6P9B9 1019 aaKnown RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 OR4F15Q8NGB8 312 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 NT5C3BQ969T7 300 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 TSSK6Q9BXA6 273 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 EBF1Q9UH73 591 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 KIR2DS5A0A0G2JLQ3 304 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 A0A0G2JNG1 304 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 KIR2DS3K7RE56 304 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ARHGEF15O94989 841 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 NSA2O95478 260 aaKnown RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 TFP02787 698 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SLC35A2P78381 396 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 HNF4GQ14541 408 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 KIR2DS5Q14953 304 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 TMEM207Q6UWW9 146 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 OR2T34Q8NGX1 318 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 OR1E3Q8WZA6 343 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 FAXDC2Q96IV6 333 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 C7orf26Q96N11 449 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 CITED4Q96RK1 184 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SERINC2Q96SA4 455 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 TIMP4Q99727 224 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 GNG12Q9UBI6 72 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SMIM28A0A1B0GU29 152 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 K7EQS6 105 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 GPR171O14626 319 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 MLLT10P55197 1068 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 NPNTQ6UXI9 565 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 CARM1Q86X55 608 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SLC22A4Q9H015 551 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ZDHHC7Q9NXF8 308 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 U3KQV3 271 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 PIK3C2AO00443 1686 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 CNTNAP5Q8WYK1 1306 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 FXYD6-FXYD2A0A087WZ82 144 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SLC5A10A0PJK1 596 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 GALR3O60755 368 aaPredicted RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 ZNF805Q5CZA5 627 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 OR5K1Q8NHB7 308 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SFXN5Q8TD22 340 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 OR52B2Q96RD2 323 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SMOQ99835 787 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 FXYD6Q9H0Q3 95 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 MYH13Q9UKX3 1938 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 LYZL6O75951 148 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ST6GAL1P15907 406 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 RAB3AP20336 220 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SERPINA2P20848 420 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 PRPS1P60891 318 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 LIPJQ5W064 366 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 LBX2Q6XYB7 198 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 OTOP1Q7RTM1 612 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 FAM185AQ8N0U4 392 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 SLC35G3Q8N808 338 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 HUS1BQ8NHY5 278 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ZNF419Q96HQ0 510 aaPredicted RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 TECTBQ96PL2 329 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 BIN3Q9NQY0 253 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ADAM29Q9UKF5 820 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 PRDM15P57071 1507 aaPredicted RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 RP2O75695 350 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 BEST1O76090 585 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 CTDNEP1O95476 244 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 C8orf89P0DMQ9 161 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 GABRB2P47870 512 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 CYCSP99999 105 aaKnown RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 UNC50Q53HI1 259 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 DDX31Q9H8H2 851 aaKnown RBP3.26□□□□□ -1.89
NEB-201ENST00000172853 MOB1AQ9H8S9 216 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 PNPOQ9NVS9 261 aa3.26□□□□□ -1.89
NEB-201ENST00000172853 RNF150Q9ULK6 438 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms