RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 PIGTQ969N2 578 aa14.26□□□□□ -0.13
ERCC1-201ENST00000013807 GATA5Q9BWX5 397 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-201ENST00000013807 OPN3Q9H1Y3 402 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-201ENST00000013807 GSX1Q9H4S2 264 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-201ENST00000013807 MKS1Q9NXB0 559 aa14.26□□□□□ -0.13
ERCC1-201ENST00000013807 GIN1Q9NXP7 522 aa14.26□□□□□ -0.13
ERCC1-201ENST00000013807 MID2Q9UJV3 735 aa14.26□□□□□ -0.13
ERCC1-201ENST00000013807 FN1P02751 2386 aaKnown RBP14.26□□□□□ -0.13
ERCC1-201ENST00000013807 CSPG4Q6UVK1 2322 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 TRIM13O60858 407 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 AQP8O94778 261 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 KCNK2O95069 426 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 OXSR1O95747 527 aaPredicted RBP14.25□□□□□ -0.13
ERCC1-201ENST00000013807 POU2F1P14859 743 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 LOXP28300 417 aaPredicted RBP14.25□□□□□ -0.13
ERCC1-201ENST00000013807 ASMTP46597 345 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 MANFP55145 182 aaKnown RBP14.25□□□□□ -0.13
ERCC1-201ENST00000013807 RAC1P63000 192 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 HSPB3Q12988 150 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 PCLAFQ15004 111 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 CTU2Q2VPK5 515 aaKnown RBP14.25□□□□□ -0.13
ERCC1-201ENST00000013807 UGT3A2Q3SY77 523 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 ZNF385BQ569K4 471 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 KANK2Q63ZY3 851 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 MFSD12Q6NUT3 480 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 PRSS57Q6UWY2 283 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 EXOC3L1Q86VI1 746 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 MISPQ8IVT2 679 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 C10orf107Q8IVU9 208 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 SLC16A11Q8NCK7 471 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 NUP43Q8NFH3 380 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 OR5M1Q8NGP8 315 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 PSMA8Q8TAA3 256 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 CIDECQ96AQ7 238 aaPredicted RBP14.25□□□□□ -0.13
ERCC1-201ENST00000013807 ZBTB8AQ96BR9 441 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 PPCDCQ96CD2 204 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 GMPPAQ96IJ6 420 aaPredicted RBP14.25□□□□□ -0.13
ERCC1-201ENST00000013807 MS4A4EQ96PG1 132 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 FAM111AQ96PZ2 611 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 C12orf65Q9H3J6 166 aaKnown RBP14.25□□□□□ -0.13
ERCC1-201ENST00000013807 GLRX2Q9NS18 164 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 KLHL28Q9NXS3 571 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 PTGDR2Q9Y5Y4 395 aa14.25□□□□□ -0.13
ERCC1-201ENST00000013807 A0A1W2PQD3 144 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 SEC14L5O43304 696 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 ARHGEF9O43307 516 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 NDUFB5O43674 189 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 SOX30O94993 753 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 ACP2P11117 423 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 NID1P14543 1247 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 PPP3CBP16298 524 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 FPR1P21462 350 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 GPC1P35052 558 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 ACKR1Q16570 336 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 CPTPQ5TA50 214 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 LRIG3Q6UXM1 1119 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 C22orf34Q6ZV56 151 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 WDR75Q8IWA0 830 aaKnown RBP14.24□□□□□ -0.13
ERCC1-201ENST00000013807 OR6K3Q8NGY3 331 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 IGFBPL1Q8WX77 278 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 MED18Q9BUE0 208 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 OR10A4Q9H209 315 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 UBQLN4Q9NRR5 601 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 DUSP22Q9NRW4 184 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 C6orf203Q9P0P8 240 aaPredicted RBP14.24□□□□□ -0.13
ERCC1-201ENST00000013807 ATP6V1HQ9UI12 483 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 PROCRQ9UNN8 238 aa14.24□□□□□ -0.13
ERCC1-201ENST00000013807 USF3Q68DE3 2245 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 NPHS1O60500 1241 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 SS18L1O75177 396 aaPredicted RBP14.23□□□□□ -0.13
ERCC1-201ENST00000013807 CHEK2O96017 543 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 BCKDHAP12694 445 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 SERPINB4P48594 390 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 SGCBQ16585 318 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 DUSP5Q16690 384 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 PLPPR5Q32ZL2 321 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 ANKRD26P1Q6NSI1 321 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 C20orf204Q6ZNR8 217 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 ESPNLQ6ZVH7 1005 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 R3HCC1LQ7Z5L2 792 aaKnown RBP14.23□□□□□ -0.13
ERCC1-201ENST00000013807 CCDC63Q8NA47 563 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 UBLCP1Q8WVY7 318 aaPredicted RBP14.23□□□□□ -0.13
ERCC1-201ENST00000013807 TSSK3Q96PN8 268 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 STACQ99469 402 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 EQTNQ9NQ60 294 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 SIRT3Q9NTG7 399 aaPredicted RBP14.23□□□□□ -0.13
ERCC1-201ENST00000013807 SH3BP4Q9P0V3 963 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 BAIAP2L1Q9UHR4 511 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 JMJD1CQ15652 2540 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 CADP27708 2225 aa14.23□□□□□ -0.13
ERCC1-201ENST00000013807 A0A1W2PRB8 838 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 INHBBP09529 407 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 LINC00032P0C843 101 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 DDX5P17844 614 aaKnown RBP14.22□□□□□ -0.13
ERCC1-201ENST00000013807 SLC6A8P48029 635 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 RFX3P48380 749 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 PRKAG1P54619 331 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 SIRPAP78324 504 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 MTERF4Q7Z6M4 381 aaKnown RBP14.22□□□□□ -0.13
ERCC1-201ENST00000013807 ZAR1Q86SH2 424 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms