RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Pum2Q80U58 1066 aaKnown RBP12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Carnmt1Q80UY1 400 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Spag1Q80ZX8 901 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 TifabQ8JZM6 147 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Ccm2Q8K2Y9 453 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr1316Q8VG12 314 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr689Q8VG18 320 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Deaf1Q9Z1T5 566 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Nup210Q9QY81 1886 aaKnown RBP12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm13420A0A140LJJ2 248 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr1056A2AVY0 313 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Vmn2r98E9PZ56 857 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Vmn2r18E9Q280 788 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 ChadlE9Q7T7 748 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Vmn1r14H3BJ46 303 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Prdx4O08807 274 aaKnown RBP12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 P01667 111 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Hoxa2P31245 372 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 VipP32648 170 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfp41Q02526 198 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 AmbpQ07456 349 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Arntl2Q2VPD4 579 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Ccdc190Q3URK1 288 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Slc47a2Q3V050 573 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Snx33Q4VAA7 574 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Slc35g3Q5F297 340 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Taar7aQ5QD12 358 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Lasp1Q61792 263 aaKnown RBP12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Arhgef39Q66JY6 344 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Mgat4bQ812F8 548 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Npsr1Q8BZP8 371 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Serpina11Q8CIE0 424 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Bloc1s5Q8R015 185 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Vmn1r32Q8R2D9 302 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Adap2Q8R2V5 381 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr535Q8VGL3 312 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Mlc1Q8VHK5 382 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Rcbtb2Q99LJ7 551 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Pbx4Q99NE9 378 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Pdzk1ip1Q9CQH0 114 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Snapc3Q9D2C9 407 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Dusp6Q9DBB1 381 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Rnf32Q9JIT1 368 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Dcst2A0A140LIJ0 701 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 PvrigA0A1B0GS01 234 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr228A0A1L1SR98 313 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Pgm2A2CEK3 580 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Dnajb3O35723 242 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Hoxd9P28357 339 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Stfa2P35174 103 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Tbx5P70326 518 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Myadml2Q08AU7 307 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Itpripl2Q3UV16 535 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Defb48Q3UW22 87 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 UnklQ5FWH2 727 aaKnown RBP12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Znf182Q6P560 627 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 PrlhrQ6VMN6 370 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Samd14Q8K070 417 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cypt12Q9DAR6 119 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Dkk3Q9QUN9 349 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Ulk2Q9QY01 1037 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Trim3Q9R1R2 744 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 TrioQ0KL02 3102 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm13539A0A1B0GSM6 183 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Esp22A8R0V4 111 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm6576F6YTZ4 274 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Vmn1r20K7N778 303 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 MycP01108 439 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Tcf3P15806 651 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Nat2P50295 290 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Eif4eP63073 217 aaKnown RBP12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Smad5P97454 465 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gpr162Q3UN16 588 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 C130050O18RikQ497Y9 356 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Opa3Q505D7 179 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cd53Q61451 219 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Dalrd3Q6PJN8 538 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 PisdQ8BSF4 406 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 RhdQ8CF94 418 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Aoc1Q8JZQ5 751 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 FgbQ8K0E8 481 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr1232Q8VEX7 311 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr821Q8VG45 310 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Idh3bQ91VA7 384 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 GhitmQ91VC9 346 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 D6Wsu163eQ91YN0 552 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Wdr6Q99ME2 1125 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Rassf1Q99MK9 340 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Mrpl43Q99N89 183 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Spaca1Q9DA48 305 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Clca3a2Q9EQR4 902 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cyp2d22Q9JKY7 500 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Srpk3Q9Z0G2 565 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 H2afb1S4R1E0 115 aa12.61□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm13271B1AYH9 182 aa12.6□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfp809G3X9G7 402 aa12.6□□□□□ -0.39
Nup88-201ENSMUST00000035283 Il1r2P27931 410 aa12.6□□□□□ -0.39
Nup88-201ENSMUST00000035283 Ube2e3P52483 207 aa12.6□□□□□ -0.39
Nup88-201ENSMUST00000035283 Acss3Q14DH7 682 aa12.6□□□□□ -0.39
Nup88-201ENSMUST00000035283 Xkr5Q5GH66 676 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms