RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 RgmaQ6PCX7 454 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Unc119bQ8C4B4 251 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vmn1r75Q8R289 305 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mocs2Q9Z223 189 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Rasgef1aA0A0N4SVR5 498 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mpeg1A1L314 713 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm6569D3YTM9 175 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Prss56F2YMG0 604 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Acvr2aP27038 513 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Nell1Q2VWQ2 810 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 C130050O18RikQ497Y9 356 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Sox11Q7M6Y2 395 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 AasdhQ80WC9 1100 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Jazf1Q80ZQ5 243 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Fbxl14Q8BID8 400 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Serinc2Q8K0E7 450 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Zc3h10Q8R205 435 aaKnown RBP7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pex12Q8VC48 359 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr447Q8VGP6 310 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Zfp61Q923D1 555 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Rsph9Q9D9V4 276 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Stub1Q9WUD1 304 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Fbxw24E9PXM9 466 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Drd4P51436 387 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Zfp39Q02525 718 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Sox9Q04887 507 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ccbe1Q3MI99 408 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mylk4Q5SUV5 386 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Il15raQ60819 263 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ripk1Q60855 656 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Laptm4aQ60961 233 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Sohlh1Q6IUP1 357 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cpeb2Q812E0 521 aaKnown RBP7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mettl7a1Q8C6B0 244 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ptges3lQ9D9A7 131 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Clec3aQ9EPW4 196 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Copz2Q9JHH9 205 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ak4Q9WUR9 223 aaKnown RBP7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 CcniQ9Z2V9 377 aa7.98□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gtpbp1O08582 668 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Stfa3P35173 103 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Jmjd8Q3TA59 316 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Nlrc3Q5DU56 1064 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Sgk494Q5SYL1 278 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Doc2aQ7TNF0 405 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Znf775Q8BI73 538 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 PxkQ8BX57 582 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Blzf1Q8R2X8 403 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Clec14aQ8VCP9 459 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Lrg1Q91XL1 342 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Imp3Q921Y2 184 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mbd3l1Q9D9H3 186 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Clca3a1Q9QX15 902 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Rhox2bA2A447 191 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cd300cA2A7V7 229 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cd300ld4A2A7W1 245 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Rhox2cA2AWL9 191 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ppt2O35448 302 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Wnt4P22724 351 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 AcadlP51174 430 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Actc1P68033 377 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Acta1P68134 377 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Kcnk6Q3TBV4 313 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Spag8Q3V0Q6 470 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pydc3Q3V3Q4 588 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pced1aQ6P1Z5 449 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Smarcd3Q6P9Z1 483 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cd300ld3Q6SJQ5 245 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Eci3Q78JN3 317 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Las2Q8CB14 526 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr1387Q8VFA9 311 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Snx4Q91YJ2 450 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Thumpd1Q99J36 350 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Arl4dQ99PE9 201 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Zdhhc6Q9CPV7 413 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ndrg2Q9QYG0 371 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cpne6Q9Z140 557 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 IghdA0A0A6YW14 291 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr396-ps1A0A0U1RNF5 211 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 S100a2J3QMC7 104 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 ItgamP05555 1153 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 CfpP11680 464 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cfl1P18760 166 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cers1P27545 350 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Hoxc4Q08624 264 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Igsf5Q7TSN7 370 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Lrrtm2Q8BGA3 515 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ces2eQ8BK48 559 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 St8sia6Q8K4T1 398 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr849Q8VFF6 312 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mrpl28Q9D1B9 257 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cypt12Q9DAR6 119 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 TrilQ9DBY4 809 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Lpar3Q9EQ31 354 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm43796A0A0J9YV32 372 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr1025-ps1A0A140T8K3 312 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Lrrc72A0A1Y7VMI0 288 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vmn2r98E9PZ56 857 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 1700080E11RikE9Q9G1 206 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Omt2aF6ZJR3 104 aa7.97□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms