RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Kcnj5P48545 419 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Entpd6Q3U0P5 455 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cnpy1Q4VAB4 94 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 PfplQ5RKV8 702 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Il10rbQ61190 349 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 PianpQ6P1B3 278 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ttc29Q80VM3 471 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gpr176Q80WT4 515 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Zfp763Q8BIC7 588 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cmtr2Q8BWQ4 767 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Dnajc22Q8CHS2 339 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Q8R2K8 148 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ppp1r14cQ8R4S0 164 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr693Q8VF89 316 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ephx1Q9D379 455 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Mbd3l1Q9D9H3 186 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ak4Q9WUR9 223 aaKnown RBP15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 CerklA2AQH1 525 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rnf165E9QAU8 347 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm3327F7C9A1 213 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 JupQ02257 745 aaKnown RBP15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Bcap29Q61334 240 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 FlcnQ8QZS3 579 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr853Q8VGG6 305 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Chrm3Q9ERZ3 589 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm14085A2AWR5 660 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Skint9A7TZG3 319 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 L3mbtl4B1B1A0 621 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Smim22J3QP37 91 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr1425K7N659 312 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gtpbp1O08582 668 aaKnown RBP15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Smpd2O70572 419 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Sec24aQ3U2P1 1090 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Sgk494Q5SYL1 278 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Prr14Q7TPN9 612 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr765Q7TRI6 309 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 DpcdQ8BPA8 203 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Pqlc3Q8C6U2 202 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Krtcap3Q8K177 240 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gulp1Q8K2A1 304 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr767Q8VG33 309 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr821Q8VG45 310 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Slc3a1Q91WV7 685 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 PolmQ9JIW4 496 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Bmp10Q9R229 421 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 BC025446A0A087WQT1 134 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ndor1A2AI05 598 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Kcnmb3E9Q7U0 239 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr1249L7MU51 318 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 AurkcO88445 282 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 ChrneP20782 493 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 PnpP23492 289 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Sstr2P30875 369 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Apcdd1Q3U128 514 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Zfp974Q3UVF6 752 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Thoc6Q5U4D9 341 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 NnatQ61979 81 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Enpp3Q6DYE8 874 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Tssk6Q925K9 273 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 4930553M12RikQ9CUH1 165 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ppil3Q9D6L8 161 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Elovl4Q9EQC4 312 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Praf2Q9JIG8 178 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Plscr3Q9JIZ9 296 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Srd5a3Q9WUP4 330 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Lama1P19137 3084 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Atg2bQ80XK6 2075 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 4932443I19RikA0A286YE38 169 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm8973D3YX71 104 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr653E9PVA0 317 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm3594E9Q2A7 267 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Adam3F8VQ03 822 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 PdynO35417 248 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 ApelaP0DMC4 54 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Nudt19P11930 357 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Zic1P46684 447 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Eif1adQ3THJ3 170 aaKnown RBP15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Pgap2Q3TQR0 254 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Hs3st2Q673U1 367 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr1231Q7TQZ8 313 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Zc3hc1Q80YV2 501 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Lypd4Q8BVP6 246 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 NdnfQ8C119 568 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rdh10Q8VCH7 341 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Vmn1r85Q8VIB8 308 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 TipinQ91WA1 278 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cts3Q91ZD5 332 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Wdr73Q9CWR1 371 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ndufs4Q9CXZ1 175 aa15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Snrnp200Q6P4T2 2136 aaKnown RBP15.23■□□□□ 0.03
Trim28-201ENSMUST00000005705 Chst13D3Z6E3 336 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 RrhO35214 337 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rgs16P97428 201 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Nkx3-2P97503 333 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Fam98aQ3TJZ6 515 aaKnown RBP15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Grxcr1Q50H32 290 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Sez6Q7TSK2 991 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 JamlQ80UL9 379 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Znf786Q8BV42 777 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rae1Q8C570 368 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms