RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 BCORQ6W2J9 1755 aa20.03■□□□□ 0.8
SRRM4-204ENST00000641899 CCDC85CA6NKD9 419 aa20.03■□□□□ 0.8
SRRM4-204ENST00000641899 ERVV-1B6SEH8 477 aa20.03■□□□□ 0.8
SRRM4-204ENST00000641899 MLLT1Q03111 559 aaPredicted RBP20.03■□□□□ 0.8
SRRM4-204ENST00000641899 NIM1KQ8IY84 436 aa20.03■□□□□ 0.8
SRRM4-204ENST00000641899 RBM17Q96I25 401 aaKnown RBP20.03■□□□□ 0.8
SRRM4-204ENST00000641899 PRAMEF22A3QJZ6 481 aa20.02■□□□□ 0.8
SRRM4-204ENST00000641899 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.8
SRRM4-204ENST00000641899 MAP2K2P36507 400 aa20.02■□□□□ 0.8
SRRM4-204ENST00000641899 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.8
SRRM4-204ENST00000641899 GRM1Q13255 1194 aa20.02■□□□□ 0.8
SRRM4-204ENST00000641899 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
SRRM4-204ENST00000641899 MCM10Q7L590 875 aa20.02■□□□□ 0.8
SRRM4-204ENST00000641899 PNISRQ8TF01 805 aaKnown RBP20.02■□□□□ 0.8
SRRM4-204ENST00000641899 VPS33BQ9H267 617 aa20.02■□□□□ 0.8
SRRM4-204ENST00000641899 NBPF26B4DH59 902 aa20.01■□□□□ 0.79
SRRM4-204ENST00000641899 NBPF10Q6P3W6 841 aaKnown RBP20.01■□□□□ 0.79
SRRM4-204ENST00000641899 NBPF15Q8N660 670 aa20.01■□□□□ 0.79
SRRM4-204ENST00000641899 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
SRRM4-204ENST00000641899 HOXA10P31260 410 aaPredicted RBP20■□□□□ 0.79
SRRM4-204ENST00000641899 HLFQ16534 295 aa20■□□□□ 0.79
SRRM4-204ENST00000641899 ADAMTSL1Q8N6G6 1762 aa19.99■□□□□ 0.79
SRRM4-204ENST00000641899 SUPT20HQ8NEM7 779 aa19.99■□□□□ 0.79
SRRM4-204ENST00000641899 CRAMP1Q96RY5 1269 aa19.99■□□□□ 0.79
SRRM4-204ENST00000641899 ADARB2Q9NS39 739 aaKnown RBP19.99■□□□□ 0.79
SRRM4-204ENST00000641899 TLL2Q9Y6L7 1015 aa19.99■□□□□ 0.79
SRRM4-204ENST00000641899 CACNA1SQ13698 1873 aa19.99■□□□□ 0.79
SRRM4-204ENST00000641899 IBTKQ9P2D0 1353 aaPredicted RBP19.98■□□□□ 0.79
SRRM4-204ENST00000641899 PPEF1O14829 653 aaPredicted RBP19.98■□□□□ 0.79
SRRM4-204ENST00000641899 EPS15P42566 896 aa19.98■□□□□ 0.79
SRRM4-204ENST00000641899 SCNN1DP51172 638 aa19.98■□□□□ 0.79
SRRM4-204ENST00000641899 CYP4F22Q6NT55 531 aa19.98■□□□□ 0.79
SRRM4-204ENST00000641899 NUTM1Q86Y26 1132 aa19.98■□□□□ 0.79
SRRM4-204ENST00000641899 NGEFQ8N5V2 710 aa19.98■□□□□ 0.79
SRRM4-204ENST00000641899 MAP3K15Q6ZN16 1313 aa19.98■□□□□ 0.79
SRRM4-204ENST00000641899 PPIP5K2O43314 1243 aa19.97■□□□□ 0.79
SRRM4-204ENST00000641899 PPP1R42Q7Z4L9 355 aa19.97■□□□□ 0.79
SRRM4-204ENST00000641899 RIC1Q4ADV7 1423 aa19.96■□□□□ 0.79
SRRM4-204ENST00000641899 HHIPL1Q96JK4 782 aa19.96■□□□□ 0.79
SRRM4-204ENST00000641899 NLRP3Q96P20 1036 aa19.96■□□□□ 0.79
SRRM4-204ENST00000641899 RGS19P49795 217 aa19.95■□□□□ 0.78
SRRM4-204ENST00000641899 CFAP44Q96MT7 982 aa19.95■□□□□ 0.78
SRRM4-204ENST00000641899 GPRC5DQ9NZD1 345 aa19.95■□□□□ 0.78
SRRM4-204ENST00000641899 RRP7AQ9Y3A4 280 aaKnown RBP19.95■□□□□ 0.78
SRRM4-204ENST00000641899 ABCC12Q96J65 1359 aa19.95■□□□□ 0.78
SRRM4-204ENST00000641899 PARP10Q53GL7 1025 aa19.94■□□□□ 0.78
SRRM4-204ENST00000641899 CST9Q5W186 159 aa19.94■□□□□ 0.78
SRRM4-204ENST00000641899 PCDH10Q9P2E7 1040 aa19.94■□□□□ 0.78
SRRM4-204ENST00000641899 CDHR2Q9BYE9 1310 aa19.94■□□□□ 0.78
SRRM4-204ENST00000641899 SNED1Q8TER0 1413 aa19.93■□□□□ 0.78
SRRM4-204ENST00000641899 CELF2O95319 508 aaKnown RBP19.93■□□□□ 0.78
SRRM4-204ENST00000641899 GPTP24298 496 aa19.93■□□□□ 0.78
SRRM4-204ENST00000641899 BRPF1P55201 1214 aaPredicted RBP19.93■□□□□ 0.78
SRRM4-204ENST00000641899 DCTN1Q14203 1278 aa19.93■□□□□ 0.78
SRRM4-204ENST00000641899 ZC3H15Q8WU90 426 aaKnown RBP19.93■□□□□ 0.78
SRRM4-204ENST00000641899 ZNRF3Q9ULT6 936 aa19.93■□□□□ 0.78
SRRM4-204ENST00000641899 TRAF5O00463 557 aa19.92■□□□□ 0.78
SRRM4-204ENST00000641899 TCERG1O14776 1098 aaKnown RBP19.92■□□□□ 0.78
SRRM4-204ENST00000641899 TNIP1Q15025 636 aa19.92■□□□□ 0.78
SRRM4-204ENST00000641899 SAPCD2Q86UD0 394 aa19.92■□□□□ 0.78
SRRM4-204ENST00000641899 ATP6V0A2Q9Y487 856 aa19.92■□□□□ 0.78
SRRM4-204ENST00000641899 MYL6BP14649 208 aa19.91■□□□□ 0.78
SRRM4-204ENST00000641899 AOC3Q16853 763 aa19.91■□□□□ 0.78
SRRM4-204ENST00000641899 SUSD4Q5VX71 490 aa19.91■□□□□ 0.78
SRRM4-204ENST00000641899 BCL2L13Q9BXK5 485 aa19.91■□□□□ 0.78
SRRM4-204ENST00000641899 ZBTB3Q9H5J0 574 aa19.91■□□□□ 0.78
SRRM4-204ENST00000641899 ERBB4Q15303 1308 aa19.91■□□□□ 0.78
SRRM4-204ENST00000641899 BBOX1O75936 387 aa19.9■□□□□ 0.78
SRRM4-204ENST00000641899 AOC2O75106 756 aa19.89■□□□□ 0.77
SRRM4-204ENST00000641899 NOGQ13253 232 aa19.89■□□□□ 0.77
SRRM4-204ENST00000641899 CIAPIN1Q6FI81 312 aa19.89■□□□□ 0.77
SRRM4-204ENST00000641899 DPP8Q6V1X1 898 aaPredicted RBP19.89■□□□□ 0.77
SRRM4-204ENST00000641899 GIGYF2Q6Y7W6 1299 aaKnown RBP19.89■□□□□ 0.77
SRRM4-204ENST00000641899 CDC37L1Q7L3B6 337 aa19.89■□□□□ 0.77
SRRM4-204ENST00000641899 ZNF34Q8IZ26 560 aa19.89■□□□□ 0.77
SRRM4-204ENST00000641899 UTP14AQ9BVJ6 771 aaKnown RBP19.89■□□□□ 0.77
SRRM4-204ENST00000641899 THSD7BQ9C0I4 1608 aa19.89■□□□□ 0.77
SRRM4-204ENST00000641899 PNNQ9H307 717 aaKnown RBP19.89■□□□□ 0.77
SRRM4-204ENST00000641899 MIS18AQ9NYP9 233 aa19.89■□□□□ 0.77
SRRM4-204ENST00000641899 H7C1D1 291 aa19.88■□□□□ 0.77
SRRM4-204ENST00000641899 GMPSP49915 693 aaPredicted RBP19.88■□□□□ 0.77
SRRM4-204ENST00000641899 FMR1Q06787 632 aaKnown RBP eCLIP19.88■□□□□ 0.77
SRRM4-204ENST00000641899 CXCL9Q07325 125 aa19.88■□□□□ 0.77
SRRM4-204ENST00000641899 TTLL7Q6ZT98 887 aa19.88■□□□□ 0.77
SRRM4-204ENST00000641899 ZNF408Q9H9D4 720 aa19.88■□□□□ 0.77
SRRM4-204ENST00000641899 TSKSQ9UJT2 592 aa19.88■□□□□ 0.77
SRRM4-204ENST00000641899 UBN2Q6ZU65 1347 aa19.87■□□□□ 0.77
SRRM4-204ENST00000641899 NTSR2O95665 410 aa19.87■□□□□ 0.77
SRRM4-204ENST00000641899 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
SRRM4-204ENST00000641899 EIF4A1P60842 406 aaKnown RBP19.87■□□□□ 0.77
SRRM4-204ENST00000641899 RTFDC1Q9BY42 306 aaPredicted RBP19.87■□□□□ 0.77
SRRM4-204ENST00000641899 MCOLN1Q9GZU1 580 aa19.87■□□□□ 0.77
SRRM4-204ENST00000641899 PGAP2Q9UHJ9 254 aa19.87■□□□□ 0.77
SRRM4-204ENST00000641899 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
SRRM4-204ENST00000641899 MPNDQ8N594 471 aa19.86■□□□□ 0.77
SRRM4-204ENST00000641899 DGKZQ13574 1117 aa19.85■□□□□ 0.77
SRRM4-204ENST00000641899 SLC10A5Q5PT55 438 aa19.85■□□□□ 0.77
SRRM4-204ENST00000641899 DDX46Q7L014 1031 aaKnown RBP19.85■□□□□ 0.77
SRRM4-204ENST00000641899 TMC4Q7Z404 712 aa19.85■□□□□ 0.77
SRRM4-204ENST00000641899 SP8Q8IXZ3 490 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms