RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 TRMT1Q9NXH9 659 aaKnown RBP14.15□□□□□ -0.14
RBFOX1-224ENST00000641259 PARP4Q9UKK3 1724 aaKnown RBP14.15□□□□□ -0.14
RBFOX1-224ENST00000641259 PROSER3Q2NL68 480 aa14.14□□□□□ -0.15
RBFOX1-224ENST00000641259 TOM1L2Q6ZVM7 507 aa14.14□□□□□ -0.15
RBFOX1-224ENST00000641259 CCAR2Q8N163 923 aaKnown RBP14.14□□□□□ -0.15
RBFOX1-224ENST00000641259 COL16A1Q07092 1604 aaPredicted RBP14.14□□□□□ -0.15
RBFOX1-224ENST00000641259 ZNF445P59923 1031 aa14.14□□□□□ -0.15
RBFOX1-224ENST00000641259 SLC52A2Q9HAB3 445 aa14.14□□□□□ -0.15
RBFOX1-224ENST00000641259 CALCOCO1Q9P1Z2 691 aa14.14□□□□□ -0.15
RBFOX1-224ENST00000641259 GIGYF1O75420 1035 aaPredicted RBP14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 NUCB1Q02818 461 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 CACNA1FO60840 1977 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 GLI3P10071 1580 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 MRC1P22897 1456 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 PATL2C9JE40 543 aaKnown RBP14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 MBD3O95983 291 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 TRIM5Q9C035 493 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 ST7Q9NRC1 585 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 SPG7Q9UQ90 795 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 AHDC1Q5TGY3 1603 aaPredicted RBP14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 GIMAP6Q6P9H5 292 aa14.13□□□□□ -0.15
RBFOX1-224ENST00000641259 PIBF1Q8WXW3 757 aa14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 GNL2Q13823 731 aaKnown RBP14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 CAMK4Q16566 473 aa14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 CEP85Q6P2H3 762 aa14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 UPF3BQ9BZI7 483 aaKnown RBP14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 OGFRQ9NZT2 677 aa14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 IFNL2Q8IZJ0 200 aa14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.15
RBFOX1-224ENST00000641259 RSPH14Q9UHP6 348 aa14.11□□□□□ -0.15
RBFOX1-224ENST00000641259 SOS1Q07889 1333 aaPredicted RBP14.11□□□□□ -0.15
RBFOX1-224ENST00000641259 CDC45O75419 566 aa14.11□□□□□ -0.15
RBFOX1-224ENST00000641259 IBSPP21815 317 aaPredicted RBP14.11□□□□□ -0.15
RBFOX1-224ENST00000641259 ZNF790Q6PG37 636 aa14.11□□□□□ -0.15
RBFOX1-224ENST00000641259 PYCARDQ9ULZ3 195 aa14.11□□□□□ -0.15
RBFOX1-224ENST00000641259 COL22A1Q8NFW1 1626 aaPredicted RBP14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 SMARCA5O60264 1052 aaPredicted RBP14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 KRT222Q8N1A0 295 aa14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 PTGS1P23219 599 aa14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 TOGARAM1Q9Y4F4 1720 aa14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 ADCY9O60503 1353 aa14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 GADD45BO75293 160 aaPredicted RBP14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 GTF2A1P52655 376 aaPredicted RBP14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 RABEP1Q15276 862 aa14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 SNX21Q969T3 373 aa14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 RILPL2Q969X0 211 aa14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 BTG4Q9NY30 223 aa14.1□□□□□ -0.15
RBFOX1-224ENST00000641259 HOXB7P09629 217 aa14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 ANKRD44Q8N8A2 993 aa14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 CCT4P50991 539 aaKnown RBP14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 PDIA6Q15084 440 aa14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 NOL10Q9BSC4 688 aaKnown RBP14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 ANO2Q9NQ90 1003 aa14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 FILIP1Q7Z7B0 1213 aa14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 ZNF496Q96IT1 587 aaPredicted RBP14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 DCAF5Q96JK2 942 aa14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 CARD10Q9BWT7 1032 aa14.09□□□□□ -0.15
RBFOX1-224ENST00000641259 VPS37CA5D8V6 355 aaPredicted RBP14.08□□□□□ -0.16
RBFOX1-224ENST00000641259 PIP4K2AP48426 406 aaPredicted RBP14.08□□□□□ -0.16
RBFOX1-224ENST00000641259 PXDNLA1KZ92 1463 aa14.08□□□□□ -0.16
RBFOX1-224ENST00000641259 NEK11Q8NG66 645 aa14.08□□□□□ -0.16
RBFOX1-224ENST00000641259 PHLPP1O60346 1717 aa14.08□□□□□ -0.16
RBFOX1-224ENST00000641259 PI4KAP2A4QPH2 592 aa14.08□□□□□ -0.16
RBFOX1-224ENST00000641259 PI4KAP1Q8N8J0 262 aa14.08□□□□□ -0.16
RBFOX1-224ENST00000641259 LRMPQ12912 555 aa14.07□□□□□ -0.16
RBFOX1-224ENST00000641259 CCDC186Q7Z3E2 898 aa14.07□□□□□ -0.16
RBFOX1-224ENST00000641259 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
RBFOX1-224ENST00000641259 USP44Q9H0E7 712 aa14.07□□□□□ -0.16
RBFOX1-224ENST00000641259 EVA1CP58658 441 aa14.07□□□□□ -0.16
RBFOX1-224ENST00000641259 GCC1Q96CN9 775 aa14.07□□□□□ -0.16
RBFOX1-224ENST00000641259 IL2RBP14784 551 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 C16orf71Q8IYS4 520 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 TEX35Q5T0J7 233 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 FAM177A1Q8N128 213 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 DDX54Q8TDD1 881 aaKnown RBP14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 DCTPP1Q9H773 170 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 PLEKHG2Q9H7P9 1386 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 PCDH11XQ9BZA7 1347 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 PCDH11YQ9BZA8 1340 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 PNMA6EA0A0J9YXQ4 647 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 CKAP2LQ8IYA6 745 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 PDLIM2Q96JY6 352 aa14.06□□□□□ -0.16
RBFOX1-224ENST00000641259 DBF4Q9UBU7 674 aaPredicted RBP14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 USP16Q9Y5T5 823 aa14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 PAPPAQ13219 1627 aa14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 BEND3Q5T5X7 828 aa14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 HOMER1Q86YM7 354 aa14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 OTUD7AQ8TE49 926 aaPredicted RBP14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 PLCH1Q4KWH8 1693 aa14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 UBR2Q8IWV8 1755 aa14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 TSHZ3Q63HK5 1081 aa14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 FEZ1Q99689 392 aa14.05□□□□□ -0.16
RBFOX1-224ENST00000641259 LOC102724159A0A0B4J2E5 919 aa14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 CABP4P57796 275 aa14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 PWP2Q15269 919 aaKnown RBP14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 LRRFIP2Q9Y608 721 aaKnown RBP14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 NBPF7P0C2Y1 421 aaPredicted RBP14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 PIP4K2BP78356 416 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms