RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 VSIG10Q8N0Z9 540 aa18.68■□□□□ 0.58
SPIN3-242ENST00000640577 TNPO1Q92973 898 aaKnown RBP18.68■□□□□ 0.58
SPIN3-242ENST00000640577 GPATCH3Q96I76 525 aa18.68■□□□□ 0.58
SPIN3-242ENST00000640577 LRP6O75581 1613 aa18.67■□□□□ 0.58
SPIN3-242ENST00000640577 ST18O60284 1047 aa18.67■□□□□ 0.58
SPIN3-242ENST00000640577 CCDC191Q8NCU4 936 aa18.67■□□□□ 0.58
SPIN3-242ENST00000640577 BOLA2Q9H3K6 86 aa18.67■□□□□ 0.58
SPIN3-242ENST00000640577 DBNLQ9UJU6 430 aaKnown RBP18.67■□□□□ 0.58
SPIN3-242ENST00000640577 NUTM2BA6NNL0 878 aaPredicted RBP18.66■□□□□ 0.58
SPIN3-242ENST00000640577 NUTM2EB1AL46 878 aaPredicted RBP18.66■□□□□ 0.58
SPIN3-242ENST00000640577 HSPA4P34932 840 aa18.66■□□□□ 0.58
SPIN3-242ENST00000640577 PRIM1P49642 420 aaKnown RBP18.66■□□□□ 0.58
SPIN3-242ENST00000640577 PIP4K2BP78356 416 aa18.66■□□□□ 0.58
SPIN3-242ENST00000640577 NUTM2AQ8IVF1 878 aaPredicted RBP18.66■□□□□ 0.58
SPIN3-242ENST00000640577 ISCA1Q9BUE6 129 aa18.66■□□□□ 0.58
SPIN3-242ENST00000640577 CIZ1Q9ULV3 898 aaPredicted RBP18.66■□□□□ 0.58
SPIN3-242ENST00000640577 CHMP3Q9Y3E7 222 aa18.66■□□□□ 0.58
SPIN3-242ENST00000640577 SPATA31A1Q5TZJ5 1347 aa18.66■□□□□ 0.58
SPIN3-242ENST00000640577 RAD50Q92878 1312 aa18.66■□□□□ 0.58
SPIN3-242ENST00000640577 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
SPIN3-242ENST00000640577 TNNI3KQ59H18 835 aa18.65■□□□□ 0.58
SPIN3-242ENST00000640577 IL17RAQ96F46 866 aa18.65■□□□□ 0.58
SPIN3-242ENST00000640577 EDC3Q96F86 508 aaKnown RBP18.65■□□□□ 0.58
SPIN3-242ENST00000640577 UPF3BQ9BZI7 483 aaKnown RBP18.65■□□□□ 0.58
SPIN3-242ENST00000640577 FPGT-TNNI3KV9GXZ4 949 aa18.65■□□□□ 0.58
SPIN3-242ENST00000640577 ANAPC15P60006 121 aa18.65■□□□□ 0.58
SPIN3-242ENST00000640577 TCIRG1Q13488 830 aa18.65■□□□□ 0.58
SPIN3-242ENST00000640577 ATG9AQ7Z3C6 839 aa18.65■□□□□ 0.58
SPIN3-242ENST00000640577 ZGPATQ8N5A5 531 aaKnown RBP18.65■□□□□ 0.58
SPIN3-242ENST00000640577 EVI5LQ96CN4 794 aa18.65■□□□□ 0.58
SPIN3-242ENST00000640577 CYP19A1P11511 503 aaPredicted RBP18.64■□□□□ 0.58
SPIN3-242ENST00000640577 MCCP23508 829 aa18.64■□□□□ 0.58
SPIN3-242ENST00000640577 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.58
SPIN3-242ENST00000640577 NDUFB9Q9Y6M9 179 aa18.64■□□□□ 0.58
SPIN3-242ENST00000640577 STARD3NLO95772 234 aa18.64■□□□□ 0.57
SPIN3-242ENST00000640577 PTH1RQ03431 593 aa18.64■□□□□ 0.57
SPIN3-242ENST00000640577 HLFQ16534 295 aa18.64■□□□□ 0.57
SPIN3-242ENST00000640577 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
SPIN3-242ENST00000640577 ZNF594Q96JF6 807 aaPredicted RBP18.64■□□□□ 0.57
SPIN3-242ENST00000640577 FAM227BQ96M60 508 aa18.64■□□□□ 0.57
SPIN3-242ENST00000640577 TEX13AQ9BXU3 409 aaPredicted RBP18.64■□□□□ 0.57
SPIN3-242ENST00000640577 SSFA2P28290 1259 aa18.63■□□□□ 0.57
SPIN3-242ENST00000640577 ARXQ96QS3 562 aa18.63■□□□□ 0.57
SPIN3-242ENST00000640577 PKP1Q13835 747 aa18.63■□□□□ 0.57
SPIN3-242ENST00000640577 SYNE4Q8N205 404 aa18.63■□□□□ 0.57
SPIN3-242ENST00000640577 DBNDD2Q9BQY9 259 aa18.63■□□□□ 0.57
SPIN3-242ENST00000640577 ZBTB1Q9Y2K1 713 aa18.63■□□□□ 0.57
SPIN3-242ENST00000640577 FAM89AQ96GI7 184 aa18.62■□□□□ 0.57
SPIN3-242ENST00000640577 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
SPIN3-242ENST00000640577 SNX14Q9Y5W7 946 aa18.62■□□□□ 0.57
SPIN3-242ENST00000640577 EPB41L2O43491 1005 aaKnown RBP18.61■□□□□ 0.57
SPIN3-242ENST00000640577 NMIQ13287 307 aaPredicted RBP18.61■□□□□ 0.57
SPIN3-242ENST00000640577 LRRC24Q50LG9 513 aa18.61■□□□□ 0.57
SPIN3-242ENST00000640577 NOL8Q76FK4 1167 aaKnown RBP18.61■□□□□ 0.57
SPIN3-242ENST00000640577 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
SPIN3-242ENST00000640577 PUS3Q9BZE2 481 aaKnown RBP18.61■□□□□ 0.57
SPIN3-242ENST00000640577 MAP3K15Q6ZN16 1313 aa18.6■□□□□ 0.57
SPIN3-242ENST00000640577 CHGBP05060 677 aa18.6■□□□□ 0.57
SPIN3-242ENST00000640577 DDB1Q16531 1140 aa18.6■□□□□ 0.57
SPIN3-242ENST00000640577 KIF6Q6ZMV9 814 aa18.6■□□□□ 0.57
SPIN3-242ENST00000640577 ACSBG1Q96GR2 724 aa18.6■□□□□ 0.57
SPIN3-242ENST00000640577 CCDC9Q9Y3X0 531 aaKnown RBP18.6■□□□□ 0.57
SPIN3-242ENST00000640577 NUP98P52948 1817 aa18.6■□□□□ 0.57
SPIN3-242ENST00000640577 A0A0D9SFI3 127 aa18.6■□□□□ 0.57
SPIN3-242ENST00000640577 GPTP24298 496 aa18.6■□□□□ 0.57
SPIN3-242ENST00000640577 TRIM28Q13263 835 aaKnown RBP18.6■□□□□ 0.57
SPIN3-242ENST00000640577 SPATA31A5Q5VU36 1347 aa18.59■□□□□ 0.57
SPIN3-242ENST00000640577 SPATA31A7Q8IWB4 1347 aa18.59■□□□□ 0.57
SPIN3-242ENST00000640577 ATP5JP18859 108 aa18.59■□□□□ 0.57
SPIN3-242ENST00000640577 CCDC85AQ96PX6 553 aaPredicted RBP18.59■□□□□ 0.57
SPIN3-242ENST00000640577 GIGYF2Q6Y7W6 1299 aaKnown RBP18.59■□□□□ 0.57
SPIN3-242ENST00000640577 KIAA1211Q6ZU35 1233 aa18.59■□□□□ 0.57
SPIN3-242ENST00000640577 TIMM10P62072 90 aa18.58■□□□□ 0.57
SPIN3-242ENST00000640577 FSD1Q9BTV5 496 aa18.58■□□□□ 0.57
SPIN3-242ENST00000640577 ANKRD36CQ5JPF3 1778 aa18.58■□□□□ 0.56
SPIN3-242ENST00000640577 SLIT2O94813 1529 aa18.58■□□□□ 0.56
SPIN3-242ENST00000640577 A0A0G2JS52 829 aa18.58■□□□□ 0.56
SPIN3-242ENST00000640577 RUFY2Q8WXA3 655 aa18.58■□□□□ 0.56
SPIN3-242ENST00000640577 CPA1P15085 419 aa18.57■□□□□ 0.56
SPIN3-242ENST00000640577 THRAP3Q9Y2W1 955 aaKnown RBP18.57■□□□□ 0.56
SPIN3-242ENST00000640577 NWD2Q9ULI1 1742 aa18.57■□□□□ 0.56
SPIN3-242ENST00000640577 EYA2O00167 538 aa18.57■□□□□ 0.56
SPIN3-242ENST00000640577 PCCAP05165 728 aaPredicted RBP18.57■□□□□ 0.56
SPIN3-242ENST00000640577 CYP2E1P05181 493 aaPredicted RBP18.57■□□□□ 0.56
SPIN3-242ENST00000640577 CDCA7Q9BWT1 371 aaPredicted RBP18.57■□□□□ 0.56
SPIN3-242ENST00000640577 TBC1D2BQ9UPU7 963 aa18.57■□□□□ 0.56
SPIN3-242ENST00000640577 CCDC171Q6TFL3 1326 aa18.56■□□□□ 0.56
SPIN3-242ENST00000640577 COL9A3Q14050 684 aaPredicted RBP18.56■□□□□ 0.56
SPIN3-242ENST00000640577 ADCK5Q3MIX3 580 aa18.56■□□□□ 0.56
SPIN3-242ENST00000640577 ZNF589Q86UQ0 364 aaPredicted RBP18.56■□□□□ 0.56
SPIN3-242ENST00000640577 NLRP10Q86W26 655 aa18.56■□□□□ 0.56
SPIN3-242ENST00000640577 ZDHHC9Q9Y397 364 aa18.56■□□□□ 0.56
SPIN3-242ENST00000640577 MYH14Q7Z406 1995 aaKnown RBP18.56■□□□□ 0.56
SPIN3-242ENST00000640577 PRPF40BQ6NWY9 871 aaKnown RBP18.55■□□□□ 0.56
SPIN3-242ENST00000640577 ZBTB38Q8NAP3 1195 aaPredicted RBP18.55■□□□□ 0.56
SPIN3-242ENST00000640577 NEUROD6Q96NK8 337 aa18.55■□□□□ 0.56
SPIN3-242ENST00000640577 TRAK2O60296 914 aa18.55■□□□□ 0.56
SPIN3-242ENST00000640577 TOM1O60784 492 aa18.55■□□□□ 0.56
SPIN3-242ENST00000640577 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
SPIN3-242ENST00000640577 CUL4AQ13619 759 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms