RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PHF20L1A8MW92 1017 aa9.89□□□□□ -0.83
CCDC7-216ENST00000640058 BTBD6Q96KE9 485 aa9.89□□□□□ -0.83
CCDC7-216ENST00000640058 TGFBR3LH3BV60 316 aa9.88□□□□□ -0.83
CCDC7-216ENST00000640058 KCTD17Q8N5Z5 321 aa9.88□□□□□ -0.83
CCDC7-216ENST00000640058 MKNK1Q9BUB5 465 aa9.88□□□□□ -0.83
CCDC7-216ENST00000640058 OCLNQ16625 522 aa9.87□□□□□ -0.83
CCDC7-216ENST00000640058 KANK3Q6NY19 840 aa9.87□□□□□ -0.83
CCDC7-216ENST00000640058 CHSY3Q70JA7 882 aa9.87□□□□□ -0.83
CCDC7-216ENST00000640058 KCNQ4P56696 695 aa9.86□□□□□ -0.83
CCDC7-216ENST00000640058 IER5Q5VY09 327 aa9.86□□□□□ -0.83
CCDC7-216ENST00000640058 BHMTQ93088 406 aa9.86□□□□□ -0.83
CCDC7-216ENST00000640058 MKL2Q9ULH7 1088 aa9.86□□□□□ -0.83
CCDC7-216ENST00000640058 HOXB4P17483 251 aaPredicted RBP9.85□□□□□ -0.83
CCDC7-216ENST00000640058 IDH3AP50213 366 aa9.85□□□□□ -0.83
CCDC7-216ENST00000640058 DMGDHQ9UI17 866 aaKnown RBP9.85□□□□□ -0.83
CCDC7-216ENST00000640058 LRFN2Q9ULH4 789 aa9.85□□□□□ -0.83
CCDC7-216ENST00000640058 SIN3BO75182 1162 aa9.84□□□□□ -0.83
CCDC7-216ENST00000640058 TBC1D8BQ0IIM8 1120 aa9.84□□□□□ -0.83
CCDC7-216ENST00000640058 NEUROD1Q13562 356 aa9.84□□□□□ -0.83
CCDC7-216ENST00000640058 C11orf91Q3C1V1 193 aa9.84□□□□□ -0.83
CCDC7-216ENST00000640058 CAPN12Q6ZSI9 719 aa9.84□□□□□ -0.83
CCDC7-216ENST00000640058 MYO19Q96H55 970 aa9.84□□□□□ -0.83
CCDC7-216ENST00000640058 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC7-216ENST00000640058 CXXC1Q9P0U4 656 aaPredicted RBP9.84□□□□□ -0.83
CCDC7-216ENST00000640058 ELOA3CA0A087WX78 387 aaPredicted RBP9.83□□□□□ -0.84
CCDC7-216ENST00000640058 ELOA3DA6NLF2 546 aaPredicted RBP9.83□□□□□ -0.84
CCDC7-216ENST00000640058 ELOA3BQ3SY89 546 aa9.83□□□□□ -0.84
CCDC7-216ENST00000640058 COX20Q5RI15 118 aa9.83□□□□□ -0.84
CCDC7-216ENST00000640058 ELOA3Q8NG57 546 aa9.83□□□□□ -0.84
CCDC7-216ENST00000640058 SAP130Q9H0E3 1048 aa9.83□□□□□ -0.84
CCDC7-216ENST00000640058 IGFLR1Q9H665 355 aa9.83□□□□□ -0.84
CCDC7-216ENST00000640058 SLAIN2Q9P270 581 aa9.83□□□□□ -0.84
CCDC7-216ENST00000640058 MICAL2O94851 1124 aa9.82□□□□□ -0.84
CCDC7-216ENST00000640058 GRNP28799 593 aaKnown RBP9.82□□□□□ -0.84
CCDC7-216ENST00000640058 DGKGP49619 791 aa9.82□□□□□ -0.84
CCDC7-216ENST00000640058 NAA30Q147X3 362 aaPredicted RBP9.82□□□□□ -0.84
CCDC7-216ENST00000640058 IFT43Q96FT9 208 aa9.82□□□□□ -0.84
CCDC7-216ENST00000640058 SUV39H2Q9H5I1 410 aa9.82□□□□□ -0.84
CCDC7-216ENST00000640058 USP20Q9Y2K6 914 aa9.82□□□□□ -0.84
CCDC7-216ENST00000640058 ALAS2P22557 587 aa9.81□□□□□ -0.84
CCDC7-216ENST00000640058 INPP5BP32019 993 aa9.81□□□□□ -0.84
CCDC7-216ENST00000640058 LINC00114Q6XXX2 140 aa9.81□□□□□ -0.84
CCDC7-216ENST00000640058 CLP1Q92989 425 aaKnown RBP9.81□□□□□ -0.84
CCDC7-216ENST00000640058 PNMA5Q96PV4 448 aa9.81□□□□□ -0.84
CCDC7-216ENST00000640058 EPB42P16452 691 aa9.8□□□□□ -0.84
CCDC7-216ENST00000640058 ADH7P40394 386 aa9.8□□□□□ -0.84
CCDC7-216ENST00000640058 ARSDP51689 593 aa9.8□□□□□ -0.84
CCDC7-216ENST00000640058 KRT25Q7Z3Z0 450 aa9.8□□□□□ -0.84
CCDC7-216ENST00000640058 DCAF5Q96JK2 942 aa9.8□□□□□ -0.84
CCDC7-216ENST00000640058 GSX2Q9BZM3 304 aa9.8□□□□□ -0.84
CCDC7-216ENST00000640058 UBE2OQ9C0C9 1292 aaKnown RBP9.8□□□□□ -0.84
CCDC7-216ENST00000640058 NFKB1P19838 968 aa9.79□□□□□ -0.84
CCDC7-216ENST00000640058 ATP2B4P23634 1241 aa9.79□□□□□ -0.84
CCDC7-216ENST00000640058 CCINQ13939 588 aa9.79□□□□□ -0.84
CCDC7-216ENST00000640058 C16orf46Q6P387 395 aa9.79□□□□□ -0.84
CCDC7-216ENST00000640058 TREML1Q86YW5 311 aa9.79□□□□□ -0.84
CCDC7-216ENST00000640058 TNFRSF25Q93038 417 aa9.79□□□□□ -0.84
CCDC7-216ENST00000640058 MDFIQ99750 246 aa9.79□□□□□ -0.84
CCDC7-216ENST00000640058 ADARB2-AS1A8MUL3 147 aa9.78□□□□□ -0.84
CCDC7-216ENST00000640058 COL8A1P27658 744 aa9.78□□□□□ -0.84
CCDC7-216ENST00000640058 GPAT2Q6NUI2 795 aa9.78□□□□□ -0.84
CCDC7-216ENST00000640058 SUPT5HO00267 1087 aaKnown RBP9.77□□□□□ -0.85
CCDC7-216ENST00000640058 GNB5O14775 395 aa9.77□□□□□ -0.85
CCDC7-216ENST00000640058 RGL4Q8IZJ4 473 aa9.77□□□□□ -0.85
CCDC7-216ENST00000640058 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.77□□□□□ -0.85
CCDC7-216ENST00000640058 OPLAHO14841 1288 aa9.76□□□□□ -0.85
CCDC7-216ENST00000640058 ALBP02768 609 aa9.76□□□□□ -0.85
CCDC7-216ENST00000640058 FAM26DQ5JW98 314 aa9.76□□□□□ -0.85
CCDC7-216ENST00000640058 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
CCDC7-216ENST00000640058 ETFBKMTQ8IXQ9 262 aa9.76□□□□□ -0.85
CCDC7-216ENST00000640058 ARID3AQ99856 593 aa9.76□□□□□ -0.85
CCDC7-216ENST00000640058 STARD13Q9Y3M8 1113 aa9.76□□□□□ -0.85
CCDC7-216ENST00000640058 CARNS1A5YM72 827 aa9.75□□□□□ -0.85
CCDC7-216ENST00000640058 M0R082 166 aa9.75□□□□□ -0.85
CCDC7-216ENST00000640058 PTCD1O75127 700 aaKnown RBP9.75□□□□□ -0.85
CCDC7-216ENST00000640058 SCNN1AP37088 669 aa9.75□□□□□ -0.85
CCDC7-216ENST00000640058 CMTR1Q8N1G2 835 aaKnown RBP9.75□□□□□ -0.85
CCDC7-216ENST00000640058 ZNF417Q8TAU3 575 aa9.75□□□□□ -0.85
CCDC7-216ENST00000640058 ZNF587Q96SQ5 575 aaPredicted RBP9.75□□□□□ -0.85
CCDC7-216ENST00000640058 RTCBQ9Y3I0 505 aaKnown RBP9.75□□□□□ -0.85
CCDC7-216ENST00000640058 TNFRSF10BO14763 440 aa9.74□□□□□ -0.85
CCDC7-216ENST00000640058 SASH3O75995 380 aa9.74□□□□□ -0.85
CCDC7-216ENST00000640058 PLA2G4EQ3MJ16 856 aa9.74□□□□□ -0.85
CCDC7-216ENST00000640058 COL26A1Q96A83 441 aa9.74□□□□□ -0.85
CCDC7-216ENST00000640058 TRIM11Q96F44 468 aa9.74□□□□□ -0.85
CCDC7-216ENST00000640058 DNAJB12Q9NXW2 375 aaKnown RBP9.74□□□□□ -0.85
CCDC7-216ENST00000640058 SEPT3Q9UH03 358 aa9.74□□□□□ -0.85
CCDC7-216ENST00000640058 PIK3R2O00459 728 aa9.73□□□□□ -0.85
CCDC7-216ENST00000640058 PPP1R15AO75807 674 aaPredicted RBP9.73□□□□□ -0.85
CCDC7-216ENST00000640058 BRD2P25440 801 aaKnown RBP9.73□□□□□ -0.85
CCDC7-216ENST00000640058 TARSP26639 723 aaKnown RBP9.73□□□□□ -0.85
CCDC7-216ENST00000640058 PLVAPQ9BX97 442 aa9.73□□□□□ -0.85
CCDC7-216ENST00000640058 ZFATQ9P243 1243 aa9.73□□□□□ -0.85
CCDC7-216ENST00000640058 SLC6A14Q9UN76 642 aa9.73□□□□□ -0.85
CCDC7-216ENST00000640058 KRBA1A5PL33 1030 aa9.72□□□□□ -0.85
CCDC7-216ENST00000640058 TMEM88BA6NKF7 163 aa9.72□□□□□ -0.85
CCDC7-216ENST00000640058 RARAP10276 462 aa9.72□□□□□ -0.85
CCDC7-216ENST00000640058 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
CCDC7-216ENST00000640058 ITGB2P05107 769 aa9.71□□□□□ -0.86
CCDC7-216ENST00000640058 MLLT1Q03111 559 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms