RNA–Protein interactions for RNA: ENST00000639920.1

PAX6-260, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-260ENST00000639920 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
PAX6-260ENST00000639920 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
PAX6-260ENST00000639920 C21orf2O43822 256 aa13.18□□□□□ -0.3
PAX6-260ENST00000639920 PRELPP51888 382 aa13.18□□□□□ -0.3
PAX6-260ENST00000639920 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
PAX6-260ENST00000639920 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
PAX6-260ENST00000639920 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
PAX6-260ENST00000639920 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
PAX6-260ENST00000639920 LTBP3Q9NS15 1303 aa13.17□□□□□ -0.3
PAX6-260ENST00000639920 CACNA1SQ13698 1873 aa13.17□□□□□ -0.3
PAX6-260ENST00000639920 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
PAX6-260ENST00000639920 HOXA10P31260 410 aaPredicted RBP13.17□□□□□ -0.3
PAX6-260ENST00000639920 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
PAX6-260ENST00000639920 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
PAX6-260ENST00000639920 RNF181Q9P0P0 153 aa13.17□□□□□ -0.3
PAX6-260ENST00000639920 LMNB1P20700 586 aa13.16□□□□□ -0.3
PAX6-260ENST00000639920 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
PAX6-260ENST00000639920 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
PAX6-260ENST00000639920 TRIM28Q13263 835 aaKnown RBP13.16□□□□□ -0.3
PAX6-260ENST00000639920 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
PAX6-260ENST00000639920 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
PAX6-260ENST00000639920 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
PAX6-260ENST00000639920 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
PAX6-260ENST00000639920 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
PAX6-260ENST00000639920 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
PAX6-260ENST00000639920 SNED1Q8TER0 1413 aa13.15□□□□□ -0.3
PAX6-260ENST00000639920 SYNE4Q8N205 404 aa13.15□□□□□ -0.3
PAX6-260ENST00000639920 ZNF526Q8TF50 670 aaPredicted RBP13.15□□□□□ -0.3
PAX6-260ENST00000639920 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
PAX6-260ENST00000639920 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 VAMP4O75379 141 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 CCDC93Q567U6 631 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
PAX6-260ENST00000639920 NLRP3Q96P20 1036 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 CRAMP1Q96RY5 1269 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 MYH16Q9H6N6 1097 aa13.14□□□□□ -0.31
PAX6-260ENST00000639920 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
PAX6-260ENST00000639920 LAMB2P55268 1798 aa13.13□□□□□ -0.31
PAX6-260ENST00000639920 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
PAX6-260ENST00000639920 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
PAX6-260ENST00000639920 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
PAX6-260ENST00000639920 EXOSC9Q06265 439 aaKnown RBP13.13□□□□□ -0.31
PAX6-260ENST00000639920 OLFM4Q6UX06 510 aa13.13□□□□□ -0.31
PAX6-260ENST00000639920 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
PAX6-260ENST00000639920 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
PAX6-260ENST00000639920 KIF3CO14782 793 aa13.12□□□□□ -0.31
PAX6-260ENST00000639920 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
PAX6-260ENST00000639920 G2E3Q7L622 706 aa13.12□□□□□ -0.31
PAX6-260ENST00000639920 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
PAX6-260ENST00000639920 DICER1Q9UPY3 1922 aaKnown RBP13.11□□□□□ -0.31
PAX6-260ENST00000639920 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 C1QTNF8P60827 252 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
PAX6-260ENST00000639920 CC2D2BQ6DHV5 1058 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 RTKN2Q8IZC4 609 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 FAM89AQ96GI7 184 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 MYD88Q99836 296 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 ABCC4O15439 1325 aa13.11□□□□□ -0.31
PAX6-260ENST00000639920 PPEF1O14829 653 aaPredicted RBP13.1□□□□□ -0.31
PAX6-260ENST00000639920 FLIIQ13045 1269 aa13.1□□□□□ -0.31
PAX6-260ENST00000639920 SLC51AQ86UW1 340 aa13.1□□□□□ -0.31
PAX6-260ENST00000639920 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
PAX6-260ENST00000639920 NMRK2Q9NPI5 230 aa13.1□□□□□ -0.31
PAX6-260ENST00000639920 CACNA1FO60840 1977 aa13.1□□□□□ -0.31
PAX6-260ENST00000639920 KDM2BQ8NHM5 1336 aa13.1□□□□□ -0.31
PAX6-260ENST00000639920 PCCAP05165 728 aaPredicted RBP13.09□□□□□ -0.31
PAX6-260ENST00000639920 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
PAX6-260ENST00000639920 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
PAX6-260ENST00000639920 PSMD1Q99460 953 aa13.09□□□□□ -0.31
PAX6-260ENST00000639920 CWC25Q9NXE8 425 aaPredicted RBP13.09□□□□□ -0.31
PAX6-260ENST00000639920 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
PAX6-260ENST00000639920 E9PSI1 815 aa13.08□□□□□ -0.32
PAX6-260ENST00000639920 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
PAX6-260ENST00000639920 GRIPAP1Q4V328 841 aa13.08□□□□□ -0.32
PAX6-260ENST00000639920 RTL5Q5HYW3 569 aaPredicted RBP13.08□□□□□ -0.32
PAX6-260ENST00000639920 DIEXFQ68CQ4 756 aaKnown RBP13.08□□□□□ -0.32
PAX6-260ENST00000639920 ZNF277Q9NRM2 450 aaPredicted RBP13.08□□□□□ -0.32
PAX6-260ENST00000639920 ATP6V0A2Q9Y487 856 aa13.08□□□□□ -0.32
PAX6-260ENST00000639920 BBOX1O75936 387 aa13.07□□□□□ -0.32
PAX6-260ENST00000639920 GRAPQ13588 217 aa13.07□□□□□ -0.32
PAX6-260ENST00000639920 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
PAX6-260ENST00000639920 GRAPLQ8TC17 118 aaPredicted RBP13.07□□□□□ -0.32
PAX6-260ENST00000639920 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
PAX6-260ENST00000639920 COL4A1P02462 1669 aa13.06□□□□□ -0.32
PAX6-260ENST00000639920 LRRC37AA6NMS7 1700 aa13.06□□□□□ -0.32
PAX6-260ENST00000639920 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
PAX6-260ENST00000639920 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
PAX6-260ENST00000639920 IARSP41252 1262 aaKnown RBP13.06□□□□□ -0.32
PAX6-260ENST00000639920 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
PAX6-260ENST00000639920 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
PAX6-260ENST00000639920 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms