RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 CCDC136Q96JN2 1154 aa9.74□□□□□ -0.85
NECAP1-220ENST00000639841 RNPC3Q96LT9 517 aaKnown RBP9.74□□□□□ -0.85
NECAP1-220ENST00000639841 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
NECAP1-220ENST00000639841 PRDM15P57071 1507 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-220ENST00000639841 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
NECAP1-220ENST00000639841 SFI1A8K8P3 1242 aa9.74□□□□□ -0.85
NECAP1-220ENST00000639841 EHHADHQ08426 723 aa9.74□□□□□ -0.85
NECAP1-220ENST00000639841 FKBP5Q13451 457 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-220ENST00000639841 TMTC2Q8N394 836 aa9.74□□□□□ -0.85
NECAP1-220ENST00000639841 ADAM33Q9BZ11 813 aa9.74□□□□□ -0.85
NECAP1-220ENST00000639841 EID1Q9Y6B2 187 aa9.74□□□□□ -0.85
NECAP1-220ENST00000639841 ERBINQ96RT1 1412 aa9.73□□□□□ -0.85
NECAP1-220ENST00000639841 ATP1A2P50993 1020 aa9.73□□□□□ -0.85
NECAP1-220ENST00000639841 TRIM50Q86XT4 487 aa9.73□□□□□ -0.85
NECAP1-220ENST00000639841 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
NECAP1-220ENST00000639841 MYOM3Q5VTT5 1437 aa9.73□□□□□ -0.85
NECAP1-220ENST00000639841 CBLBQ13191 982 aa9.72□□□□□ -0.85
NECAP1-220ENST00000639841 TSHZ1Q6ZSZ6 1077 aa9.72□□□□□ -0.85
NECAP1-220ENST00000639841 HELQQ8TDG4 1101 aa9.72□□□□□ -0.85
NECAP1-220ENST00000639841 ZDHHC16Q969W1 377 aa9.72□□□□□ -0.85
NECAP1-220ENST00000639841 FAM163AQ96GL9 167 aaPredicted RBP9.72□□□□□ -0.85
NECAP1-220ENST00000639841 SRA1Q9HD15 236 aaKnown RBP9.72□□□□□ -0.85
NECAP1-220ENST00000639841 JDP2Q8WYK2 163 aa9.72□□□□□ -0.85
NECAP1-220ENST00000639841 KANK1Q14678 1352 aa9.72□□□□□ -0.85
NECAP1-220ENST00000639841 NKTRP30414 1462 aaKnown RBP9.72□□□□□ -0.85
NECAP1-220ENST00000639841 ZNF644Q9H582 1327 aaPredicted RBP9.71□□□□□ -0.86
NECAP1-220ENST00000639841 SLC10A3P09131 477 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 PDGFRBP09619 1106 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 C4orf46Q504U0 113 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 PLEKHG4Q58EX7 1191 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 CCAR1Q8IX12 1150 aaKnown RBP9.71□□□□□ -0.86
NECAP1-220ENST00000639841 ZNF654Q8IZM8 581 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 PLCD4Q9BRC7 762 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 MAF1Q9H063 256 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 OCEL1Q9H607 264 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 FKBPLQ9UIM3 349 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 MROH1Q8NDA8 1641 aa9.71□□□□□ -0.86
NECAP1-220ENST00000639841 CTSHP09668 335 aa9.7□□□□□ -0.86
NECAP1-220ENST00000639841 PRKD2Q9BZL6 878 aa9.7□□□□□ -0.86
NECAP1-220ENST00000639841 STRCP1A6NGW2 1772 aa9.7□□□□□ -0.86
NECAP1-220ENST00000639841 CEP152O94986 1710 aa9.7□□□□□ -0.86
NECAP1-220ENST00000639841 WEE1P30291 646 aa9.7□□□□□ -0.86
NECAP1-220ENST00000639841 FGD1P98174 961 aa9.7□□□□□ -0.86
NECAP1-220ENST00000639841 PLCB3Q01970 1234 aa9.7□□□□□ -0.86
NECAP1-220ENST00000639841 RPS6KC1Q96S38 1066 aa9.7□□□□□ -0.86
NECAP1-220ENST00000639841 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.7□□□□□ -0.86
NECAP1-220ENST00000639841 LMTK2Q8IWU2 1503 aa9.69□□□□□ -0.86
NECAP1-220ENST00000639841 CROCC2H7BZ55 1655 aa9.69□□□□□ -0.86
NECAP1-220ENST00000639841 NAA30Q147X3 362 aaPredicted RBP9.69□□□□□ -0.86
NECAP1-220ENST00000639841 MAP7D1Q3KQU3 841 aa9.69□□□□□ -0.86
NECAP1-220ENST00000639841 CDAN1Q8IWY9 1227 aa9.69□□□□□ -0.86
NECAP1-220ENST00000639841 TPCN2Q8NHX9 752 aa9.69□□□□□ -0.86
NECAP1-220ENST00000639841 PNMA2Q9UL42 364 aa9.69□□□□□ -0.86
NECAP1-220ENST00000639841 TTF2Q9UNY4 1162 aaKnown RBP9.69□□□□□ -0.86
NECAP1-220ENST00000639841 NOD1Q9Y239 953 aa9.69□□□□□ -0.86
NECAP1-220ENST00000639841 NWD1Q149M9 1564 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 GPR182O15218 404 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 ATF4P18848 351 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-220ENST00000639841 CCDC102BQ68D86 513 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 EFCAB6Q5THR3 1501 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 NDUFB5O43674 189 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 SH3BP5O60239 455 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 FAM13AO94988 1023 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 COL9A1P20849 921 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 MPSTP25325 297 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 ITGAEP38570 1179 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 BIRC2Q13490 618 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 LONRF3Q496Y0 759 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 VPS8Q8N3P4 1428 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 NCOA3Q9Y6Q9 1424 aa9.68□□□□□ -0.86
NECAP1-220ENST00000639841 GJA8P48165 433 aa9.67□□□□□ -0.86
NECAP1-220ENST00000639841 ZFYVE27Q5T4F4 411 aa9.67□□□□□ -0.86
NECAP1-220ENST00000639841 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
NECAP1-220ENST00000639841 TATDN2Q93075 761 aa9.67□□□□□ -0.86
NECAP1-220ENST00000639841 IER2Q9BTL4 223 aa9.67□□□□□ -0.86
NECAP1-220ENST00000639841 TMEM2Q9UHN6 1383 aa9.67□□□□□ -0.86
NECAP1-220ENST00000639841 PRC1O43663 620 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 ZNF454Q8N9F8 522 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 PNMA3Q9UL41 463 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 PRKAB1Q9Y478 270 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 PCDHGA4Q9Y5G9 962 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 PTCD1O75127 700 aaKnown RBP9.66□□□□□ -0.86
NECAP1-220ENST00000639841 HDGFP51858 240 aaKnown RBP9.66□□□□□ -0.86
NECAP1-220ENST00000639841 GTF2IP78347 998 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 FOXD4Q12950 439 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-220ENST00000639841 C11orf96Q7Z7L8 435 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 VPS37DQ86XT2 251 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 OCSTAMPQ9BR26 566 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 CCDC87Q9NVE4 849 aa9.66□□□□□ -0.86
NECAP1-220ENST00000639841 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
NECAP1-220ENST00000639841 XIRP1Q702N8 1843 aaKnown RBP9.66□□□□□ -0.86
NECAP1-220ENST00000639841 PIK3C2BO00750 1634 aa9.65□□□□□ -0.86
NECAP1-220ENST00000639841 RPRD2Q5VT52 1461 aaKnown RBP9.65□□□□□ -0.86
NECAP1-220ENST00000639841 TMC1Q8TDI8 760 aa9.65□□□□□ -0.86
NECAP1-220ENST00000639841 ADGRB3O60242 1522 aa9.65□□□□□ -0.86
NECAP1-220ENST00000639841 KCNA6P17658 529 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 EVA1CP58658 441 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 ODR4Q5SWX8 454 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms