RNA–Protein interactions for RNA: ENST00000639673.1

TRIM43B-202, Transcript of tripartite motif containing 43B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43B, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43B-202ENST00000639673 ZNF428Q96B54 188 aa12.87□□□□□ -0.35
TRIM43B-202ENST00000639673 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
TRIM43B-202ENST00000639673 TIAM2Q8IVF5 1701 aa12.87□□□□□ -0.35
TRIM43B-202ENST00000639673 RIC1Q4ADV7 1423 aa12.87□□□□□ -0.35
TRIM43B-202ENST00000639673 KIF3CO14782 793 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 FAM9BQ8IZU0 186 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 TSPYL6Q8N831 410 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 TCIRG1Q13488 830 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 HSP90AB3PQ58FF7 597 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 UTP14AQ9BVJ6 771 aaKnown RBP12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 NMRK2Q9NPI5 230 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
TRIM43B-202ENST00000639673 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
TRIM43B-202ENST00000639673 ANKRD13DQ6ZTN6 518 aa12.85□□□□□ -0.35
TRIM43B-202ENST00000639673 PLBD2Q8NHP8 589 aa12.85□□□□□ -0.35
TRIM43B-202ENST00000639673 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
TRIM43B-202ENST00000639673 PHAXQ9H814 394 aaKnown RBP12.85□□□□□ -0.35
TRIM43B-202ENST00000639673 CCDC93Q567U6 631 aa12.84□□□□□ -0.35
TRIM43B-202ENST00000639673 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
TRIM43B-202ENST00000639673 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
TRIM43B-202ENST00000639673 RPGRQ92834 1020 aaKnown RBP12.84□□□□□ -0.35
TRIM43B-202ENST00000639673 ALDH1B1P30837 517 aa12.83□□□□□ -0.35
TRIM43B-202ENST00000639673 SLC51AQ86UW1 340 aa12.83□□□□□ -0.35
TRIM43B-202ENST00000639673 LTBP3Q9NS15 1303 aa12.83□□□□□ -0.36
TRIM43B-202ENST00000639673 ZC3H4Q9UPT8 1303 aaKnown RBP12.83□□□□□ -0.36
TRIM43B-202ENST00000639673 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
TRIM43B-202ENST00000639673 TCERG1O14776 1098 aaKnown RBP12.83□□□□□ -0.36
TRIM43B-202ENST00000639673 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.36
TRIM43B-202ENST00000639673 IL16Q14005 1332 aa12.83□□□□□ -0.36
TRIM43B-202ENST00000639673 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 HOXA10P31260 410 aaPredicted RBP12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 RNF123Q5XPI4 1314 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 FANCIQ9NVI1 1328 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 LAMB2P55268 1798 aa12.82□□□□□ -0.36
TRIM43B-202ENST00000639673 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRIM43B-202ENST00000639673 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
TRIM43B-202ENST00000639673 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
TRIM43B-202ENST00000639673 SNED1Q8TER0 1413 aa12.81□□□□□ -0.36
TRIM43B-202ENST00000639673 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
TRIM43B-202ENST00000639673 DICER1Q9UPY3 1922 aaKnown RBP12.81□□□□□ -0.36
TRIM43B-202ENST00000639673 ABCC4O15439 1325 aa12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 GLTPD2A6NH11 291 aa12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 PPEF1O14829 653 aaPredicted RBP12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 RTL5Q5HYW3 569 aaPredicted RBP12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 WDR63Q8IWG1 891 aa12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 RTKN2Q8IZC4 609 aa12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 CRAMP1Q96RY5 1269 aa12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 MYD88Q99836 296 aa12.8□□□□□ -0.36
TRIM43B-202ENST00000639673 TOMM70O94826 608 aa12.78□□□□□ -0.36
TRIM43B-202ENST00000639673 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
TRIM43B-202ENST00000639673 EXOSC9Q06265 439 aaKnown RBP12.77□□□□□ -0.36
TRIM43B-202ENST00000639673 G2E3Q7L622 706 aa12.77□□□□□ -0.36
TRIM43B-202ENST00000639673 C16orf71Q8IYS4 520 aaPredicted RBP12.77□□□□□ -0.36
TRIM43B-202ENST00000639673 CHMP4AQ9BY43 222 aa12.77□□□□□ -0.36
TRIM43B-202ENST00000639673 MAP3K2Q9Y2U5 619 aa12.77□□□□□ -0.36
TRIM43B-202ENST00000639673 DDX58O95786 925 aaKnown RBP12.77□□□□□ -0.37
TRIM43B-202ENST00000639673 IARSP41252 1262 aaKnown RBP12.77□□□□□ -0.37
TRIM43B-202ENST00000639673 TRIM28Q13263 835 aaKnown RBP12.77□□□□□ -0.37
TRIM43B-202ENST00000639673 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.37
TRIM43B-202ENST00000639673 PSMD1Q99460 953 aa12.77□□□□□ -0.37
TRIM43B-202ENST00000639673 METTL22Q9BUU2 404 aaPredicted RBP12.77□□□□□ -0.37
TRIM43B-202ENST00000639673 WDR90Q96KV7 1748 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 TAF1P21675 1872 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 COL4A1P02462 1669 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 COL4A5P29400 1685 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 IRS4O14654 1257 aaPredicted RBP12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 DDNO94850 711 aaPredicted RBP12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 CC2D2BQ6DHV5 1058 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 ATP6V0A2Q9Y487 856 aa12.76□□□□□ -0.37
TRIM43B-202ENST00000639673 ZNF521Q96K83 1311 aa12.75□□□□□ -0.37
TRIM43B-202ENST00000639673 ZNF541Q9H0D2 1346 aa12.75□□□□□ -0.37
TRIM43B-202ENST00000639673 POTECB2RU33 542 aa12.75□□□□□ -0.37
TRIM43B-202ENST00000639673 VAMP4O75379 141 aa12.75□□□□□ -0.37
TRIM43B-202ENST00000639673 HSPA6P17066 643 aa12.75□□□□□ -0.37
TRIM43B-202ENST00000639673 GRAPQ13588 217 aa12.75□□□□□ -0.37
TRIM43B-202ENST00000639673 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
TRIM43B-202ENST00000639673 ZBTB38Q8NAP3 1195 aaPredicted RBP12.75□□□□□ -0.37
TRIM43B-202ENST00000639673 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms